CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_AchrUn_randomG11290_001
(
Musa acuminata
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
GSMUA_AchrUn_randomG11290_001
T320131_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_AchrUn_randomP11290_001
RWP-RK
72
120
GLGFDEIKNYFYMPITKAAKEMNVGLTVLKKRCRELGIARWPHRKMKSL
Links
Other
RWP-RK
family TFs
Other
Musa acuminata
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30024.m001687
Ricinus communis
30024.m001687
N
0.735
30138.m004071
Ricinus communis
30138.m004071
I
0.714
AC207342.3_FG001
Zea mays
AC207342.3_FG001
N
0.816
AMTR_s00021p00218190
Amborella trichopoda
AMTR_s00021p00218190
N
0.714
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
0.811
BGIOSGA001434
Oryza indica
BGIOSGA001434
N
0.816
BGIOSGA022580
Oryza indica
BGIOSGA022580
I
0.735
Bo2g046220
Brassica oleracea
Bo2g046220
N
0.735
Bo7g064180
Brassica oleracea
Bo7g064180
I
0.735
Bo9g108730
Brassica oleracea
Bo9g108730
N
0.735
Bostr.26833s0978
Boechera stricta
Bostr.26833s0978
N
0.735
Bra003088
Brassica rapa
Bra003088
N
0.735
Bra012122
Brassica rapa
Bra012122
I
0.735
Bra022622
Brassica rapa
Bra022622
N
0.735
BRADI2G40920
Brachypodium distachyon
BRADI2G40920
N
0.816
BRADI2G61760
Brachypodium distachyon
BRADI2G61760
N
0.755
Cagra.0084s0050
Capsella grandiflora
Cagra.0084s0050
N
0.776
Carubv10028317m.g
Capsella rubella
Carubv10028317m.g
N
0.776
cassava34339.m1
Manihot esculenta
cassava34339.m1
N
0.735
cassava35166.m1
Manihot esculenta
cassava35166.m1
I
0.735
Ca_13151
Cicer arietinum
Ca_13151
I
0.714
chr1.CM0033.390.nc
Lotus japonicus
chr1.CM0033.390.nc
N
0.714
Cla019404
Citrullus lanatus
Cla019404
I
0.735
evm.TU.supercontig_3.98
Carica papaya
evm.TU.supercontig_3.98
N
0.714
evm.TU.supercontig_423.7
Carica papaya
evm.TU.supercontig_423.7
I
0.714
F775_03178
Aegilops tauschii
F775_03178
N
0.837
F775_07483
Aegilops tauschii
F775_07483
I
0.714
fgenesh1_pg.C_scaffold_2000886
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000886
I
0.714
fgenesh1_pg.C_scaffold_8002648
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002648
I
0.714
fgenesh1_pm.C_scaffold_8001005
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001005
N
0.735
gene26015-v1.0-hybrid
Fragaria vesca
gene26015-v1.0-hybrid
I
0.714
GLYMA06G13540
Glycine max
GLYMA06G13540
N
0.714
Gorai.003G121600
Gossypium raimondii
Gorai.003G121600
N
0.755
Gorai.006G266900
Gossypium raimondii
Gorai.006G266900
I
0.714
Gorai.008G193400
Gossypium raimondii
Gorai.008G193400
I
0.714
GRMZM2G071322
Zea mays
GRMZM2G071322
N
0.837
GRMZM2G392306
Zea mays
GRMZM2G392306
I
0.735
GSMUA_Achr4G08610_001
Musa acuminata
GSMUA_Achr4G08610_001
N
0.959
LPERR01G16660
Leersia perrieri
LPERR01G16660
N
0.816
LPERR06G07570
Leersia perrieri
LPERR06G07570
I
0.714
Lus10005921.g
Linum usitatissimum
Lus10005921.g
N
0.714
MDP0000141137
Malus domestica
MDP0000141137
N
0.714
MDP0000261199
Malus domestica
MDP0000261199
I
0.735
MDP0000266172
Malus domestica
MDP0000266172
I
0.714
mgf025545m
Mimulus guttatus
mgf025545m
N
0.755
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.784
MLOC_59560
Hordeum vulgare
MLOC_59560
I
0.735
OB06G17750
Oryza brachyantha
OB06G17750
I
0.735
OBART01G19230
Oryza barthii
OBART01G19230
N
0.816
OGLUM01G22860
Oryza glumaepatula
OGLUM01G22860
N
0.837
OMERI06G09770
Oryza meridionalis
OMERI06G09770
I
0.735
ONIVA01G21910
Oryza nivara
ONIVA01G21910
N
0.816
ONIVA06G09450
Oryza nivara
ONIVA06G09450
I
0.735
OPUNC01G19590
Oryza punctata
OPUNC01G19590
N
0.816
OPUNC06G07940
Oryza punctata
OPUNC06G07940
I
0.735
orange1.1g036926m.g
Citrus sinensis
orange1.1g036926m.g
I
0.714
ORGLA06G0077700
Oryza glaberrima
ORGLA06G0077700
I
0.735
ORUFI01G21630
Oryza rufipogon
ORUFI01G21630
N
0.816
ORUFI06G08510
Oryza rufipogon
ORUFI06G08510
I
0.735
OS06G0228950
Oryza sativa
OS06G0228950
I
0.735
Pavir.Aa00708
Panicum virgatum
Pavir.Aa00708
I
0.714
Pavir.Ab02992
Panicum virgatum
Pavir.Ab02992
I
0.714
Pavir.Da01160
Panicum virgatum
Pavir.Da01160
I
0.735
Pavir.Ea01492
Panicum virgatum
Pavir.Ea01492
N
0.837
Pavir.Eb01347
Panicum virgatum
Pavir.Eb01347
N
0.837
Pavir.J13146
Panicum virgatum
Pavir.J13146
I
0.735
PDK_20s1383532g001
Phoenix dactylifera
PDK_20s1383532g001
I
0.714
PDK_20s1788591g001
Phoenix dactylifera
PDK_20s1788591g001
N
0.857
PGSC0003DMG400018531
Solanum tuberosum
PGSC0003DMG400018531
N
0.735
Pm019768
Prunus mume
Pm019768
N
0.714
Pm024905
Prunus mume
Pm024905
I
0.755
POPTR_0012s02390
Populus trichocarpa
POPTR_0012s02390
N
0.735
POPTR_0015s01410
Populus trichocarpa
POPTR_0015s01410
N
0.735
PRUPE_ppa015130mg
Prunus persica
PRUPE_ppa015130mg
N
0.714
PRUPE_ppa023107mg
Prunus persica
PRUPE_ppa023107mg
I
0.755
RKD4
Arabidopsis thaliana
AT5G53040
N
0.755
SapurV1A.0498s0250
Salix purpurea
SapurV1A.0498s0250
N
0.714
Sb03g025130
Sorghum bicolor
Sb03g025130
N
0.816
Sb10g008120
Sorghum bicolor
Sb10g008120
I
0.735
scaffold_103100001.1
Arabidopsis lyrata
scaffold_103100001.1
I
0.714
Si005102m.g
Setaria italica
Si005102m.g
N
0.857
Si008273m.g
Setaria italica
Si008273m.g
I
0.735
Si020172m.g
Setaria italica
Si020172m.g
I
0.730
Solyc03g083040.1
Solanum lycopersicum
Solyc03g083040.1
N
0.735
Solyc03g116010.1
Solanum lycopersicum
Solyc03g116010.1
I
0.714
TCM_014009
Theobroma cacao
TCM_014009
I
0.714
TCM_015430
Theobroma cacao
TCM_015430
N
0.776
Thhalv10015321m.g
Eutrema salsugineum
Thhalv10015321m.g
N
0.714
Traes_7DS_405F08A53
Triticum aestivum
Traes_7DS_405F08A53
I
0.714
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
0.755
VIT_16s0098g01730
Vitis vinifera
VIT_16s0098g01730
N
0.735