GPUH_0001196001 (Gongylonema pulchrum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPUH_0001196001 T336365_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0001196001-mRNA-1 Sox 56 93

Links

Other Sox family TFs
Other Gongylonema pulchrum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.485
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.426
ASTEI08849 Anopheles stephensi ASTEI08849 N 0.443
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N 0.419
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.478
Bm7765 Brugia malayi Bm7765 N 0.509
Bm9369 Brugia malayi Bm9369 N 0.509
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.509
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.509
ENSORLG00000018700 Oryzias latipes ENSORLG00000018700 N 0.451
e_gw1.88.21.1 Fragilariopsis cylindrus e_gw1.88.21.1 N 0.419
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.431
GLOTRDRAFT_107384 Gloeophyllum trabeum GLOTRDRAFT_107384 I 0.418
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.455
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.491
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.741
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.465
H101_08199 Trichophyton interdigitale H101_08199 N 0.460
HBP1 Homo sapiens ENSG00000105856 D 0.434
HMEL014563 Heliconius melpomene HMEL014563 N 0.432
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.416
ISCW005293 Ixodes scapularis ISCW005293 N 0.463
ISCW008318 Ixodes scapularis ISCW008318 N 0.432
L798_04020 Zootermopsis nevadensis L798_04020 N 0.452
L798_09360 Zootermopsis nevadensis L798_09360 N 0.452
LOAG_11340 Loa loa LOAG_11340 N 0.509
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.509
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.509
NECAME_14932 Necator americanus NECAME_14932 N 0.478
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.509
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.509
Ocbimv22010533m.g Octopus bimaculoides Ocbimv22010533m.g N 0.419
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.478
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.509
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.471
OS02G0258250 Oryza sativa OS02G0258250 N 0.432
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.539
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.441
PK25712.1 Cannabis sativa PK25712.1 N 0.449
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.447
Sjc_0009880 Schistosoma japonicum Sjc_0009880 N 0.450
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.451
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.416
TRE_0001899601 Trichobilharzia regenti TRE_0001899601 N 0.417
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.509
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.509
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.465