Bo8g071150 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo8g071150 T000931_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.789 0.980
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.772 0.940
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.753 0.940
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g071150.1 AP2 30 81

Links

Other AP2 family TFs
Other Brassica oleracea TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_15940 Aegilops tauschii F775_15940 N 0.000
F775_28371 Aegilops tauschii F775_28371 N 0.000
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.000
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.000
PK09018.1 Cannabis sativa PK09018.1 N 0.000
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.000
Cla001429 Citrullus lanatus Cla001429 N 0.000
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.000
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.000
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.000
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.000
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.000
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.000
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.000
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.000
MDP0000152670 Malus domestica MDP0000152670 N 0.000
MDP0000804652 Malus domestica MDP0000804652 N 0.000
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.000
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.000
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.000
OBART07G20130 Oryza barthii OBART07G20130 N 0.000
OB07G25870 Oryza brachyantha OB07G25870 N 0.000
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.000
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.000
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.000
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.000
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.000
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.000
CIGR2 Oryza sativa OS07G0583600 N 0.000
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.000
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N 0.000
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.000
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.000
Pm012019 Prunus mume Pm012019 N 0.000
Pm015021 Prunus mume Pm015021 N 0.000
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.000
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.000
27613.m000642 Ricinus communis 27613.m000642 N 0.000
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.000
Si029418m.g Setaria italica Si029418m.g N 0.000
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.000
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.000
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.000
TCM_030733 Theobroma cacao TCM_030733 N 0.000
TCM_002319 Theobroma cacao TCM_002319 N 0.000
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.000
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.000
Traes_5AL_886E8DACD Triticum aestivum Traes_5AL_886E8DACD N 0.000
Traes_5BL_1E751EF1F Triticum aestivum Traes_5BL_1E751EF1F N 0.000
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.000
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.000
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.000
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.000
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.000