MTR_1g049140 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g049140 T002776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TOE2
M00851_2.00 		Arabidopsis thaliana
NNNNTACGAGGWN
NWCCTCGTANNNN		 PBM
Franco-Zorrilla et al.(2014)
TOE2 		0.851 0.979
SMZ
M08402_2.00 		Arabidopsis thaliana
YCTCGTAC
GTACGAGR		 ChIP-chip
Mathelier et al.(2014)
MA0553.1 		0.836 0.938
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH41353 AP2 136 185
KEH41354 AP2 136 185
KEH41355 AP2 136 185

Links

Other AP2 family TFs
Other Medicago truncatula TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22650 Aegilops tauschii F775_22650 N
F775_32151 Aegilops tauschii F775_32151 N
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N
MYB114 Arabidopsis thaliana AT1G66380 I
AtMYB10 Arabidopsis thaliana AT3G12820 D
MYB21 Arabidopsis thaliana AT3G27810 I
ATMYB48 Arabidopsis thaliana AT3G46130 I
MYB27 Arabidopsis thaliana AT3G53200 D
WER Arabidopsis thaliana AT5G14750 D
MYB86 Arabidopsis thaliana AT5G26660 I
TT2 Arabidopsis thaliana AT5G35550 I
MYB24 Arabidopsis thaliana AT5G40350 D
MYB59 Arabidopsis thaliana AT5G59780 D
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N
Bo2g011790 Brassica oleracea Bo2g011790 N
Bo3g017760 Brassica oleracea Bo3g017760 N
Bo5g131980 Brassica oleracea Bo5g131980 N
Bra009910 Brassica rapa Bra009910 N
PK27824.1 Cannabis sativa PK27824.1 N
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N
Cucsa.061660 Cucumis sativus Cucsa.061660 I
Cucsa.379880 Cucumis sativus Cucsa.379880 I
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N
GLYMA16G00920 Glycine max GLYMA16G00920 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I
MLOC_13019 Hordeum vulgare MLOC_13019 I
MLOC_16981 Hordeum vulgare MLOC_16981 I
MLOC_17928 Hordeum vulgare MLOC_17928 I
MLOC_56753 Hordeum vulgare MLOC_56753 I
LjSGA_032074.1 Lotus japonicus LjSGA_032074.1 N
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N
MDP0000139931 Malus domestica MDP0000139931 N
MDP0000153773 Malus domestica MDP0000153773 N
MDP0000169874 Malus domestica MDP0000169874 N
MDP0000475808 Malus domestica MDP0000475808 N
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N
MTR_2g096380 Medicago truncatula MTR_2g096380 I
MTR_4g063100 Medicago truncatula MTR_4g063100 I
MTR_6g055910 Medicago truncatula MTR_6g055910 I
MTR_7g111290 Medicago truncatula MTR_7g111290 I
mgf001247m Mimulus guttatus mgf001247m N
mgf018110m Mimulus guttatus mgf018110m N
mgf021749m Mimulus guttatus mgf021749m N
mgf026463m Mimulus guttatus mgf026463m N
mgf026560m Mimulus guttatus mgf026560m N
OBART12G16130 Oryza barthii OBART12G16130 N
ORGLA01G0040600 Oryza glaberrima ORGLA01G0040600 N
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N
BGIOSGA002307 Oryza indica BGIOSGA002307 N
BGIOSGA013008 Oryza indica BGIOSGA013008 N
BGIOSGA027658 Oryza indica BGIOSGA027658 N
BGIOSGA037085 Oryza indica BGIOSGA037085 N
OLONG_004747 Oryza longistaminata OLONG_004747 N
OS01G0975300 Oryza sativa OS01G0975300 N
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N
Pavir.J23620 Panicum virgatum Pavir.J23620 N
Pavir.J24653 Panicum virgatum Pavir.J24653 N
Pavir.J36591 Panicum virgatum Pavir.J36591 I
PDK_20s1316381g001 Phoenix dactylifera PDK_20s1316381g001 N
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I
30147.m013749 Ricinus communis 30147.m013749 N
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I
Si003873m.g Setaria italica Si003873m.g N
Sb08g018580 Sorghum bicolor Sb08g018580 I
TCM_005371 Theobroma cacao TCM_005371 I
TCM_013983 Theobroma cacao TCM_013983 I
TCM_021433 Theobroma cacao TCM_021433 I
Traes_2AL_E8C400686 Triticum aestivum Traes_2AL_E8C400686 N
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N
Traes_2DS_EEE59C2E7 Triticum aestivum Traes_2DS_EEE59C2E7 N
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N
TRIUR3_12300 Triticum urartu TRIUR3_12300 N
TRIUR3_32110 Triticum urartu TRIUR3_32110 N
GRMZM2G001223 Zea mays GRMZM2G001223 I
GRMZM2G032180 Zea mays GRMZM2G032180 N
GRMZM2G106558 Zea mays GRMZM2G106558 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GRMZM2G305856 Zea mays GRMZM2G305856 I