ORGLA09G0079700 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA09G0079700 T003949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.700 0.714
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.700 0.714
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA09G0079700.1 AP2 46 106
ORGLA09G0079700.1 AP2 148 200

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

399 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02064 Aegilops tauschii F775_02064 N 0.806
F775_02400 Aegilops tauschii F775_02400 I 0.824
F775_06373 Aegilops tauschii F775_06373 N 0.784
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.919
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.873
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.804
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.807
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.902
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.914
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.841
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.860
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.892
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.851
ADAP Arabidopsis thaliana AT1G16060 I 0.887
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.883
WRI1 Arabidopsis thaliana AT3G54320 I 0.882
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.882
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.892
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.860
BRADI1G64240 Brachypodium distachyon BRADI1G64240 I
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.824
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.855
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.772
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.922
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.833
Bo5g021520 Brassica oleracea Bo5g021520 N 0.856
Bo6g067950 Brassica oleracea Bo6g067950 I 0.882
Bo6g124080 Brassica oleracea Bo6g124080 N 0.858
Bo8g083590 Brassica oleracea Bo8g083590 I 0.882
Bra003178 Brassica rapa Bra003178 N 0.851
Bra007066 Brassica rapa Bra007066 N 0.851
Bra026082 Brassica rapa Bra026082 I 0.883
Bra035137 Brassica rapa Bra035137 I 0.890
PK04008.1 Cannabis sativa PK04008.1 I 0.880
PK24809.1 Cannabis sativa PK24809.1 I 0.839
PK26651.1 Cannabis sativa PK26651.1 I 0.906
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.882
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.867
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.817
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.845
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.882
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.850
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.809
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.828
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.915
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.856
Ca_10533 Cicer arietinum Ca_10533 N 0.809
Ca_17532 Cicer arietinum Ca_17532 N 0.875
Ca_20689 Cicer arietinum Ca_20689 N 0.829
Cla015555 Citrullus lanatus Cla015555 N 0.883
Cla017294 Citrullus lanatus Cla017294 N 0.796
Cla019044 Citrullus lanatus Cla019044 N 0.884
Cla020765 Citrullus lanatus Cla020765 N 0.842
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.851
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.892
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.854
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.902
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.778
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.902
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.851
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.854
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.750
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.880
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.910
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.870
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.808
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.867
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.918
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.836
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.839
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.854
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.887
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.851
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.811
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.820
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.838
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.890
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.888
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.899
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.886
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.888
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.910
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.910
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.832
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.856
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.835
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.829
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.899
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.857
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.834
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.838
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.823
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.787
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.898
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.894
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.875
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.804
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.915
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.847
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.700
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.830
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.846
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.901
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.786
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.892
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.860
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.807
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.845
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.898
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.808
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.860
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.838
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.840
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.840
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.904
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.796
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.805
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.892
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.734
MDP0000133423 Malus domestica MDP0000133423 N 0.888
MDP0000166059 Malus domestica MDP0000166059 N 0.816
MDP0000186581 Malus domestica MDP0000186581 N 0.839
MDP0000206674 Malus domestica MDP0000206674 N 0.827
MDP0000231748 Malus domestica MDP0000231748 N 0.889
MDP0000281784 Malus domestica MDP0000281784 I 0.839
MDP0000297698 Malus domestica MDP0000297698 N 0.839
MDP0000318457 Malus domestica MDP0000318457 N 0.888
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.815
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.852
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.841
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.892
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.876
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.880
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.820
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.803
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.835
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.840
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.809
mg013664m Mimulus guttatus mg013664m N 0.829
mgf008907m Mimulus guttatus mgf008907m I 0.849
mgf017413m Mimulus guttatus mgf017413m N 0.842
mgf019116m Mimulus guttatus mgf019116m N 0.839
mgf019814m Mimulus guttatus mgf019814m N 0.820
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.885
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.683
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.878
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.838
OBART06G03040 Oryza barthii OBART06G03040 N 0.851
OBART09G10730 Oryza barthii OBART09G10730 N 0.901
OBART12G01740 Oryza barthii OBART12G01740 N 0.773
OB01G43640 Oryza brachyantha OB01G43640 N 0.712
OB05G31600 Oryza brachyantha OB05G31600 I 0.811
OB08G23780 Oryza brachyantha OB08G23780 N 0.723
OB09G17420 Oryza brachyantha OB09G17420 I 0.931
OB11G11380 Oryza brachyantha OB11G11380 I 0.835
OB12G11690 Oryza brachyantha OB12G11690 I 0.835
ORGLA04G0150400 Oryza glaberrima ORGLA04G0150400 I 0.706
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.851
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.882
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.835
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.799
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.846
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.931
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.707
BGIOSGA016726 Oryza indica BGIOSGA016726 I 0.706
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.811
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.851
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.882
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.931
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.799
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.799
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.865
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.811
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.830
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.818
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.846
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.901
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.799
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.799
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.799
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.851
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.846
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.931
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.799
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.811
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.839
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.867
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.799
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.799
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.851
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.846
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.901
OS04G0504500 Oryza sativa OS04G0504500 I 0.706
OS05G0536250 Oryza sativa OS05G0536250 I 0.811
OS06G0145700 Oryza sativa OS06G0145700 N 0.837
OS08G0442400 Oryza sativa OS08G0442400 I 0.882
OS09G0423800 Oryza sativa OS09G0423800 I 0.931
OS12G0126300 Oryza sativa OS12G0126300 I 0.835
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.922
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.720
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.830
Pavir.J07914 Panicum virgatum Pavir.J07914 I 0.706
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.766
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.851
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.830
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.766
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.822
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.729
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.818
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.914
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.865
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.825
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.746
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.795
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.798
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.815
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.892
Pm006561 Prunus mume Pm006561 N 0.793
Pm008629 Prunus mume Pm008629 I 0.915
Pm013856 Prunus mume Pm013856 N 0.891
Pm015843 Prunus mume Pm015843 N 0.778
Pm015847 Prunus mume Pm015847 N 0.801
Pm017032 Prunus mume Pm017032 N 0.851
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.891
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.793
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.801
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.915
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.815
29822.m003477 Ricinus communis 29822.m003477 N 0.815
30069.m000440 Ricinus communis 30069.m000440 N 0.853
30114.m000507 Ricinus communis 30114.m000507 N 0.851
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.836
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.773
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.915
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.914
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.914
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.758
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.837
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.801
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.874
Si007857m.g Setaria italica Si007857m.g N 0.854
Si012026m.g Setaria italica Si012026m.g N 0.838
Si013842m.g Setaria italica Si013842m.g N 0.769
Si022186m.g Setaria italica Si022186m.g I 0.830
Si026433m.g Setaria italica Si026433m.g N 0.838
Si030129m.g Setaria italica Si030129m.g I 0.929
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.831
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.907
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.834
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.874
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.859
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.822
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.811
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.931
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.698
Sb04g025960 Sorghum bicolor Sb04g025960 I 0.706
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.879
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.774
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.830
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.851
TCM_011797 Theobroma cacao TCM_011797 N 0.786
TCM_018386 Theobroma cacao TCM_018386 N 0.862
TCM_027569 Theobroma cacao TCM_027569 I 0.916
TCM_038442 Theobroma cacao TCM_038442 N 0.888
TCM_044588 Theobroma cacao TCM_044588 I 0.879
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.789
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.846
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.837
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.923
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.837
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.854
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.824
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.769
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.812
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.818
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.915
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.863
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.769
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.815
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.851
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.830
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.879
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.802
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.921
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.843
GRMZM2G366434 Zea mays GRMZM2G366434 I 0.705
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.710