Traes_5DL_26F3B188A (Triticum aestivum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Traes_5DL_26F3B188A T005896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.786 0.837
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.786 0.837
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.783 0.837
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.772 0.857
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.771 0.857
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.748 0.714
0100010458
M01644_2.00 		Ostreococcus tauri
MGCCGSCR
YGSCGGCK		 PBM
Weirauch et al.(2014)
pTH9447 		0.741 0.735
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.734 0.816
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.728 0.776
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.728 0.776
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.725 0.755
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.720 0.714
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.712 0.694
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.710 0.673
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.710 0.673
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.707 0.694
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.707 0.694
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.707 0.694
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.703 0.673
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.703 0.673
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.703 0.714
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.703 0.673
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.703 0.714
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.703 0.714
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.703 0.714
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.701 0.673
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.700 0.714
RAP2-3
M01050_2.00 		Arabidopsis thaliana
CGCCGCCR
YGGCGGCG		 PBM
Sullivan et al.(2014)
pTH8811 		0.700 0.755
RAP2-3
M00847_2.00 		Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.3 		0.700 0.755
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.700 0.694
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.700 0.694
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.700 0.694
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.695 0.673
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.691 0.694
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.690 0.694
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.690 0.694
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.690 0.694
CRF3
M01633_2.00 		Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN		 PBM
Weirauch et al.(2014)
pTH8110 		0.690 0.633
CRF4
M01626_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8261 		0.684 0.673
CRF4
M06645_2.00 		Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN
NRGHDDHDGYGGCGGCGGHKV		 Dap-seq
OMalley et al.(2016)
CRF4_col_a 		0.684 0.673
CRF4
M06646_2.00 		Arabidopsis thaliana
YCDYCGCCGCCGYYD
HRRCGGCGGCGRHGR		 Dap-seq
OMalley et al.(2016)
CRF4_colamp_a 		0.684 0.673
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.681 0.673
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.681 0.673
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.681 0.673
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.681 0.673
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.681 0.673
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.681 0.673
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.680 0.612
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.677 0.673
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.677 0.673
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.677 0.673
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.677 0.653
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.677 0.653
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5DL_26F3B188A.2 AP2 100 151

Links

Other AP2 family TFs
Other Triticum aestivum TFs

1551 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05429 Aegilops tauschii F775_05429 I
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I
HY5 Arabidopsis lyrata scaffold_601144.1 I
HY5 Arabidopsis thaliana AT5G11260 D
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I
Bostr.29827s0269 Boechera stricta Bostr.29827s0269 I
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I
Bo2g010330 Brassica oleracea Bo2g010330 I
Bra008976 Brassica rapa Bra008976 I
Bra023317 Brassica rapa Bra023317 I
PK17235.1 Cannabis sativa PK17235.1 I
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I
Carubv10003520m.g Capsella rubella Carubv10003520m.g I
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I
Ca_21380 Cicer arietinum Ca_21380 I
Ca_22618 Cicer arietinum Ca_22618 I
Cla021273 Citrullus lanatus Cla021273 I
Cla022656 Citrullus lanatus Cla022656 I
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I
Cucsa.162360 Cucumis sativus Cucsa.162360 I
Cucsa.310450 Cucumis sativus Cucsa.310450 I
Eucgr.B02198 Eucalyptus grandis Eucgr.B02198 I
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I
GLYMA08G41450 Glycine max GLYMA08G41450 I
GLYMA18G14750 Glycine max GLYMA18G14750 I
Q39895_SOYBN Glycine max Q39895_SOYBN D
Gorai.004G274100 Gossypium raimondii Gorai.004G274100 I
LPERR02G06800 Leersia perrieri LPERR02G06800 I
LPERR06G16860 Leersia perrieri LPERR06G16860 I
Lus10002028.g Linum usitatissimum Lus10002028.g I
Lus10002900.g Linum usitatissimum Lus10002900.g I
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I
MDP0000264514 Malus domestica MDP0000264514 I
MDP0000279891 Malus domestica MDP0000279891 N
MDP0000586302 Malus domestica MDP0000586302 I
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I
MTR_3g436010 Medicago truncatula MTR_3g436010 I
MTR_7g057160 Medicago truncatula MTR_7g057160 I
SAR_estExt_Genewise1Plus.C_20674 Micromonas pusilla SAR_estExt_Genewise1Plus.C_20674 I
EuGene.0200010492 Micromonas sp RCC299 EuGene.0200010492 I
mgf012104m Mimulus guttatus mgf012104m I
mgf014305m Mimulus guttatus mgf014305m I
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I
GSMUA_Achr6G05280_001 Musa acuminata GSMUA_Achr6G05280_001 I
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I
GSMUA_Achr9G28570_001 Musa acuminata GSMUA_Achr9G28570_001 I
OBART02G07840 Oryza barthii OBART02G07840 I
OBART06G20230 Oryza barthii OBART06G20230 I
OBART06G20240 Oryza barthii OBART06G20240 I
OB02G17160 Oryza brachyantha OB02G17160 I
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I
OGLUM06G21280 Oryza glumaepatula OGLUM06G21280 I
BGIOSGA002286 Oryza indica BGIOSGA002286 I
BGIOSGA006916 Oryza indica BGIOSGA006916 I
BGIOSGA023213 Oryza indica BGIOSGA023213 I
OLONG_013539 Oryza longistaminata OLONG_013539 I
OLONG_023968 Oryza longistaminata OLONG_023968 I
OMERI06G20830 Oryza meridionalis OMERI06G20830 I
ONIVA02G09400 Oryza nivara ONIVA02G09400 I
OPUNC02G07060 Oryza punctata OPUNC02G07060 I
OPUNC06G18440 Oryza punctata OPUNC06G18440 I
ORUFI03G26360 Oryza rufipogon ORUFI03G26360 I
OS02G0203000 Oryza sativa OS02G0203000 I
OS06G0601500 Oryza sativa OS06G0601500 I
Pavir.Aa02966 Panicum virgatum Pavir.Aa02966 I
Pavir.Ab00856 Panicum virgatum Pavir.Ab00856 I
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I
e_gw1.80.85.1 Physcomitrella patens e_gw1.80.85.1 I
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I
Pm007163 Prunus mume Pm007163 I
PRUPE_ppa011967mg Prunus persica PRUPE_ppa011967mg I
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I
29848.m004650 Ricinus communis 29848.m004650 I
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I
SELMODRAFT_173274 Selaginella moellendorffii SELMODRAFT_173274 I
SELMODRAFT_440988 Selaginella moellendorffii SELMODRAFT_440988 I
SELMODRAFT_451326 Selaginella moellendorffii SELMODRAFT_451326 I
SELMODRAFT_451330 Selaginella moellendorffii SELMODRAFT_451330 I
Si018524m.g Setaria italica Si018524m.g I
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I
Sb04g007060 Sorghum bicolor Sb04g007060 I
Sb10g023420 Sorghum bicolor Sb10g023420 I
TCM_038392 Theobroma cacao TCM_038392 I
Traes_6AS_AFF47E71C Triticum aestivum Traes_6AS_AFF47E71C I
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I
Traes_6DS_F8DFD036F Triticum aestivum Traes_6DS_F8DFD036F I
Traes_7DL_68B814464 Triticum aestivum Traes_7DL_68B814464 I
TRIUR3_25965 Triticum urartu TRIUR3_25965 I
HY5 Vitis vinifera VIT_04s0008g05210 I
GRMZM2G137046 Zea mays GRMZM2G137046 I
GRMZM2G140355 Zea mays GRMZM2G140355 I