e_gw1.145.79.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 e_gw1.145.79.1 T007130_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.145.79.1 AP2 2 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.778
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.753
ERF084 Arabidopsis thaliana AT1G80580 N 0.753
Bostr.15697s0157 Boechera stricta Bostr.15697s0157 I 0.693
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.753
Bo2g095830 Brassica oleracea Bo2g095830 N 0.734
Bra008460 Brassica rapa Bra008460 N 0.778
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.753
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.753
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.773
Ca_20041 Cicer arietinum Ca_20041 I 0.783
Cla015583 Citrullus lanatus Cla015583 I 0.774
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.764
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.764
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.774
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.754
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.782
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.782
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.768
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.767
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.773
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.753
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.773
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.763
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.760
MDP0000264187 Malus domestica MDP0000264187 I 0.764
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.771
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.764
mgf023662m Mimulus guttatus mgf023662m I 0.773
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.677
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.677
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.677
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.677
OS05G0316800 Oryza sativa OS05G0316800 N 0.677
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.761
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.825
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.808
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.832
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.828
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.825
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.771
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.702
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.776
Pm013734 Prunus mume Pm013734 I 0.764
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.770
27446.m000475 Ricinus communis 27446.m000475 I 0.771
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.789
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.771
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.831
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.818
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.818
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.831
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.679
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.768
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.732
TCM_027348 Theobroma cacao TCM_027348 I 0.780
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.773