Bostr.12302s0138 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.12302s0138 T007557_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.782 0.900
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.781 0.900
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.781 0.900
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.781 0.880
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.781 0.880
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.779 0.900
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.779 0.900
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.779 0.900
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.779 0.900
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.779 0.960
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.779 0.960
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.760 0.900
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.760 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.12302s0138.1.p AP2 29 80

Links

Other AP2 family TFs
Other Boechera stricta TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_43255 Aegilops tauschii F775_43255 I
AMTR_s00024p00098860 Amborella trichopoda AMTR_s00024p00098860 I
Aquca_002_01252 Aquilegia coerulea Aquca_002_01252 I
AtIDD14 Arabidopsis lyrata fgenesh2_kg.2__1036__AT1G68130.1 I
SGR5 Arabidopsis lyrata fgenesh2_kg.5__108__AT2G01940.1 I
AtIDD16 Arabidopsis thaliana AT1G25250 I
IDD14 Arabidopsis thaliana AT1G68130 I
SGR5 Arabidopsis thaliana AT2G01940 D
Bostr.0556s0022 Boechera stricta Bostr.0556s0022 I
Bostr.15697s0010 Boechera stricta Bostr.15697s0010 I
Bostr.26959s0085 Boechera stricta Bostr.26959s0085 I
BRADI1G68730 Brachypodium distachyon BRADI1G68730 I
Bo2g134790 Brassica oleracea Bo2g134790 I
Bo3g139880 Brassica oleracea Bo3g139880 I
Bo5g043540 Brassica oleracea Bo5g043540 I
Bo6g097320 Brassica oleracea Bo6g097320 I
Bo6g106560 Brassica oleracea Bo6g106560 I
Bo9g070370 Brassica oleracea Bo9g070370 I
Bra004050 Brassica rapa Bra004050 I
Bra004283 Brassica rapa Bra004283 I
Bra010981 Brassica rapa Bra010981 I
Bra017432 Brassica rapa Bra017432 I
Bra024771 Brassica rapa Bra024771 I
Bra024841 Brassica rapa Bra024841 I
Bra026624 Brassica rapa Bra026624 I
PK17145.1 Cannabis sativa PK17145.1 I
PK25720.1 Cannabis sativa PK25720.1 I
Cagra.1111s0006 Capsella grandiflora Cagra.1111s0006 I
Cagra.2231s0014 Capsella grandiflora Cagra.2231s0014 I
Cagra.3834s0006 Capsella grandiflora Cagra.3834s0006 I
Carubv10009424m.g Capsella rubella Carubv10009424m.g I
Carubv10017254m.g Capsella rubella Carubv10017254m.g I
Carubv10020337m.g Capsella rubella Carubv10020337m.g I
evm.TU.supercontig_2.118 Carica papaya evm.TU.supercontig_2.118 I
evm.TU.supercontig_7.131 Carica papaya evm.TU.supercontig_7.131 I
Ca_05083 Cicer arietinum Ca_05083 I
Ca_22171 Cicer arietinum Ca_22171 I
Cla005913 Citrullus lanatus Cla005913 I
Cla018945 Citrullus lanatus Cla018945 I
Ciclev10015315m.g Citrus clementina Ciclev10015315m.g I
Ciclev10020125m.g Citrus clementina Ciclev10020125m.g I
orange1.1g014184m.g Citrus sinensis orange1.1g014184m.g I
orange1.1g037502m.g Citrus sinensis orange1.1g037502m.g I
Cucsa.112090 Cucumis sativus Cucsa.112090 I
Cucsa.122150 Cucumis sativus Cucsa.122150 I
Eucgr.G02066 Eucalyptus grandis Eucgr.G02066 I
Eucgr.H00574 Eucalyptus grandis Eucgr.H00574 I
Eucgr.K02292 Eucalyptus grandis Eucgr.K02292 I
Thhalv10004221m.g Eutrema salsugineum Thhalv10004221m.g I
Thhalv10009376m.g Eutrema salsugineum Thhalv10009376m.g I
Thhalv10018614m.g Eutrema salsugineum Thhalv10018614m.g I
gene00618-v1.0-hybrid Fragaria vesca gene00618-v1.0-hybrid I
gene09325-v1.0-hybrid Fragaria vesca gene09325-v1.0-hybrid I
GLYMA05G26780 Glycine max GLYMA05G26780 I
GLYMA05G33590 Glycine max GLYMA05G33590 I
GLYMA07G12170 Glycine max GLYMA07G12170 I
GLYMA08G06130 Glycine max GLYMA08G06130 I
GLYMA08G09760 Glycine max GLYMA08G09760 I
GLYMA09G30030 Glycine max GLYMA09G30030 I
Gorai.002G171100 Gossypium raimondii Gorai.002G171100 I
Gorai.005G134600 Gossypium raimondii Gorai.005G134600 I
Gorai.005G154300 Gossypium raimondii Gorai.005G154300 I
Gorai.006G190500 Gossypium raimondii Gorai.006G190500 I
Gorai.007G002600 Gossypium raimondii Gorai.007G002600 I
Gorai.008G169500 Gossypium raimondii Gorai.008G169500 I
Gorai.008G293000 Gossypium raimondii Gorai.008G293000 I
Gorai.009G329200 Gossypium raimondii Gorai.009G329200 I
LPERR03G08760 Leersia perrieri LPERR03G08760 I
LPERR08G14510 Leersia perrieri LPERR08G14510 I
Lus10026369.g Linum usitatissimum Lus10026369.g I
Lus10031314.g Linum usitatissimum Lus10031314.g I
Lus10031882.g Linum usitatissimum Lus10031882.g I
chr4.CM0387.280.nc Lotus japonicus chr4.CM0387.280.nc I
cassava18079.valid.m1 Manihot esculenta cassava18079.valid.m1 I
cassava1947.valid.m1 Manihot esculenta cassava1947.valid.m1 I
cassava36596.valid.m1 Manihot esculenta cassava36596.valid.m1 I
mgf008235m Mimulus guttatus mgf008235m I
GSMUA_Achr10G29940_001 Musa acuminata GSMUA_Achr10G29940_001 I
GSMUA_Achr5G23130_001 Musa acuminata GSMUA_Achr5G23130_001 I
GSMUA_Achr6G02490_001 Musa acuminata GSMUA_Achr6G02490_001 I
GSMUA_Achr7G18610_001 Musa acuminata GSMUA_Achr7G18610_001 I
OBART08G17550 Oryza barthii OBART08G17550 I
OB09G18760 Oryza brachyantha OB09G18760 I
ORGLA03G0094200 Oryza glaberrima ORGLA03G0094200 I
ORGLA08G0153600 Oryza glaberrima ORGLA08G0153600 I
ORGLA09G0169200 Oryza glaberrima ORGLA09G0169200 I
OGLUM03G09920 Oryza glumaepatula OGLUM03G09920 I
OGLUM08G18370 Oryza glumaepatula OGLUM08G18370 I
BGIOSGA011151 Oryza indica BGIOSGA011151 I
OMERI03G09110 Oryza meridionalis OMERI03G09110 I
OMERI08G14120 Oryza meridionalis OMERI08G14120 I
ONIVA03G10380 Oryza nivara ONIVA03G10380 I
ONIVA08G19430 Oryza nivara ONIVA08G19430 I
OPUNC03G09440 Oryza punctata OPUNC03G09440 I
OPUNC08G15410 Oryza punctata OPUNC08G15410 I
ORUFI03G10000 Oryza rufipogon ORUFI03G10000 I
OS03G0237250 Oryza sativa OS03G0237250 I
OS08G0467100 Oryza sativa OS08G0467100 I
Pavir.J12350 Panicum virgatum Pavir.J12350 I
estExt_Genewise1.C_2180024 Physcomitrella patens estExt_Genewise1.C_2180024 N
POPTR_0008s13980 Populus trichocarpa POPTR_0008s13980 I
POPTR_0010s11160 Populus trichocarpa POPTR_0010s11160 I
POPTR_0012s03730 Populus trichocarpa POPTR_0012s03730 I
POPTR_0015s05180 Populus trichocarpa POPTR_0015s05180 I
Pm005926 Prunus mume Pm005926 I
Pm025274 Prunus mume Pm025274 I
PRUPE_ppa004447mg Prunus persica PRUPE_ppa004447mg I
PRUPE_ppa005331mg Prunus persica PRUPE_ppa005331mg I
28952.m000016 Ricinus communis 28952.m000016 I
SapurV1A.0055s0020 Salix purpurea SapurV1A.0055s0020 I
SapurV1A.0074s0350 Salix purpurea SapurV1A.0074s0350 I
SapurV1A.1169s0070 Salix purpurea SapurV1A.1169s0070 I
Solyc01g005060.2 Solanum lycopersicum Solyc01g005060.2 I
Solyc06g072360.2 Solanum lycopersicum Solyc06g072360.2 I
PGSC0003DMG400026959 Solanum tuberosum PGSC0003DMG400026959 I
PGSC0003DMG400031049 Solanum tuberosum PGSC0003DMG400031049 I
TCM_011210 Theobroma cacao TCM_011210 I
TCM_039880 Theobroma cacao TCM_039880 I
Traes_4AS_2718699A7 Triticum aestivum Traes_4AS_2718699A7 I
VIT_01s0011g06400 Vitis vinifera VIT_01s0011g06400 I
VIT_17s0000g01870 Vitis vinifera VIT_17s0000g01870 I
GRMZM2G074032 Zea mays GRMZM2G074032 I
GRMZM2G465595 Zea mays GRMZM2G465595 I