ARF1 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh2_kg.2__468__AT1G59750.1 T019207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__468__AT1G59750.1 B3 124 226
fgenesh2_kg.2__468__AT1G59750.1 B3 564 615

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARF1 Arabidopsis thaliana AT1G59750 N 0.862
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N 0.897
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.731
Bo1g090350 Brassica oleracea Bo1g090350 N 0.886
Bo4g083590 Brassica oleracea Bo4g083590 N 0.899
Bra035427 Brassica rapa Bra035427 N 0.886
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N 0.958
Carubv10022415m.g Capsella rubella Carubv10022415m.g N 0.958
Cla001927 Citrullus lanatus Cla001927 N 0.882
Cla015243 Citrullus lanatus Cla015243 N 0.718
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.832
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.882
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.898
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.852
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.792
GLYMA12G28550 Glycine max GLYMA12G28550 N 0.852
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N 0.758
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.759
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.877
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.903
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.805
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.805
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.805
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.805
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.805
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.805
mgf006427m Mimulus guttatus mgf006427m N 0.838
GSMUA_Achr6G16450_001 Musa acuminata GSMUA_Achr6G16450_001 N 0.711
OBART02G20600 Oryza barthii OBART02G20600 N 0.705
OBART12G11990 Oryza barthii OBART12G11990 N 0.709
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.709
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.705
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.709
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N 0.711
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.705
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.709
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.705
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.709
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.705
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.709
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.705
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.709
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.705
OPUNC12G10620 Oryza punctata OPUNC12G10620 N 0.709
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.705
ARF7 Oryza sativa OS02G0557200 N 0.705
ARF24 Oryza sativa OS12G0479400 N 0.709
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.828
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.812
29609.m000587 Ricinus communis 29609.m000587 N 0.863
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.792
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.812
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.785
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.800
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.774
TCM_027113 Theobroma cacao TCM_027113 I 0.873
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N 0.768
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N 0.711
TRIUR3_33501 Triticum urartu TRIUR3_33501 N 0.711
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N 0.711