NPAS2 (Callithrix jacchus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCJAG00000021202 T033377_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Npas2
M01731_2.00 		Mus musculus
NVCACGTGBN
NVCACGTGBN		 PBM
Weirauch et al.(2014)
pTH5457 		0.914 1.000
NPAS2
M04158_2.00 		Homo sapiens
NRCACGTGKH
DMCACGTGYN		 SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX 		0.914 1.000
Npas2
M09468_2.00 		Mus musculus
VKCACRTGKM
KMCAYGTGMB		 Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860 		0.914 1.000
NPAS2
M04159_2.00 		Homo sapiens
DVCRCRTGKH
DMCAYGYGBH		 SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000039498 bHLH 10 59
ENSCJAP00000042895 bHLH 73 122

Links

Other bHLH family TFs
Other Callithrix jacchus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02064 Aegilops tauschii F775_02064 N
F775_02400 Aegilops tauschii F775_02400 I
F775_06373 Aegilops tauschii F775_06373 N
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N
ADAP Arabidopsis thaliana AT1G16060 I
AT1G79700 Arabidopsis thaliana AT1G79700 I
WRI1 Arabidopsis thaliana AT3G54320 I
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N
BRADI1G64240 Brachypodium distachyon BRADI1G64240 I
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I
Bo5g021520 Brassica oleracea Bo5g021520 N
Bo6g067950 Brassica oleracea Bo6g067950 I
Bo6g124080 Brassica oleracea Bo6g124080 N
Bo8g083590 Brassica oleracea Bo8g083590 I
Bra003178 Brassica rapa Bra003178 N
Bra007066 Brassica rapa Bra007066 N
Bra026082 Brassica rapa Bra026082 I
Bra035137 Brassica rapa Bra035137 I
PK04008.1 Cannabis sativa PK04008.1 I
PK24809.1 Cannabis sativa PK24809.1 I
PK26651.1 Cannabis sativa PK26651.1 I
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N
Carubv10010918m.g Capsella rubella Carubv10010918m.g N
Carubv10018845m.g Capsella rubella Carubv10018845m.g I
Carubv10020688m.g Capsella rubella Carubv10020688m.g N
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N
Ca_10533 Cicer arietinum Ca_10533 N
Ca_17532 Cicer arietinum Ca_17532 N
Ca_20689 Cicer arietinum Ca_20689 N
Cla015555 Citrullus lanatus Cla015555 N
Cla017294 Citrullus lanatus Cla017294 N
Cla019044 Citrullus lanatus Cla019044 N
Cla020765 Citrullus lanatus Cla020765 N
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N
Cucsa.106090 Cucumis sativus Cucsa.106090 N
Cucsa.170790 Cucumis sativus Cucsa.170790 I
Cucsa.282940 Cucumis sativus Cucsa.282940 N
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N
GLYMA02G36880 Glycine max GLYMA02G36880 I
GLYMA04G24010 Glycine max GLYMA04G24010 N
GLYMA06G30840 Glycine max GLYMA06G30840 N
GLYMA07G02380 Glycine max GLYMA07G02380 I
GLYMA08G23630 Glycine max GLYMA08G23630 I
GLYMA08G24420 Glycine max GLYMA08G24420 N
GLYMA08G40831 Glycine max GLYMA08G40831 N
GLYMA09G37540 Glycine max GLYMA09G37540 N
GLYMA15G34770 Glycine max GLYMA15G34770 N
GLYMA17G07860 Glycine max GLYMA17G07860 I
GLYMA18G16236 Glycine max GLYMA18G16236 N
GLYMA18G49101 Glycine max GLYMA18G49101 N
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I
LPERR01G30020 Leersia perrieri LPERR01G30020 N
LPERR05G19870 Leersia perrieri LPERR05G19870 I
LPERR08G13500 Leersia perrieri LPERR08G13500 N
LPERR09G07570 Leersia perrieri LPERR09G07570 N
LPERR12G01610 Leersia perrieri LPERR12G01610 N
Lus10001553.g Linum usitatissimum Lus10001553.g N
Lus10005253.g Linum usitatissimum Lus10005253.g N
Lus10008939.g Linum usitatissimum Lus10008939.g N
Lus10013268.g Linum usitatissimum Lus10013268.g N
Lus10024101.g Linum usitatissimum Lus10024101.g I
Lus10028880.g Linum usitatissimum Lus10028880.g N
Lus10030671.g Linum usitatissimum Lus10030671.g N
Lus10030792.g Linum usitatissimum Lus10030792.g N
Lus10036719.g Linum usitatissimum Lus10036719.g I
Lus10037209.g Linum usitatissimum Lus10037209.g I
Lus10041618.g Linum usitatissimum Lus10041618.g I
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N
MDP0000133423 Malus domestica MDP0000133423 N
MDP0000166059 Malus domestica MDP0000166059 N
MDP0000186581 Malus domestica MDP0000186581 N
MDP0000206674 Malus domestica MDP0000206674 N
MDP0000231748 Malus domestica MDP0000231748 N
MDP0000281784 Malus domestica MDP0000281784 I
MDP0000297698 Malus domestica MDP0000297698 N
MDP0000318457 Malus domestica MDP0000318457 N
cassava11368.m1 Manihot esculenta cassava11368.m1 N
cassava16315.m1 Manihot esculenta cassava16315.m1 N
cassava39084.m1 Manihot esculenta cassava39084.m1 I
MTR_2g460730 Medicago truncatula MTR_2g460730 N
MTR_4g007770 Medicago truncatula MTR_4g007770 N
MTR_4g130270 Medicago truncatula MTR_4g130270 I
MTR_6g011490 Medicago truncatula MTR_6g011490 N
MTR_7g009410 Medicago truncatula MTR_7g009410 N
MTR_8g044040 Medicago truncatula MTR_8g044040 N
MTR_8g044070 Medicago truncatula MTR_8g044070 N
MTR_8g468920 Medicago truncatula MTR_8g468920 N
mg013664m Mimulus guttatus mg013664m N
mgf008907m Mimulus guttatus mgf008907m I
mgf017413m Mimulus guttatus mgf017413m N
mgf019116m Mimulus guttatus mgf019116m N
mgf019814m Mimulus guttatus mgf019814m N
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I
OBART06G03040 Oryza barthii OBART06G03040 N
OBART09G10730 Oryza barthii OBART09G10730 N
OBART12G01740 Oryza barthii OBART12G01740 N
OB01G43640 Oryza brachyantha OB01G43640 N
OB05G31600 Oryza brachyantha OB05G31600 I
OB08G23780 Oryza brachyantha OB08G23780 N
OB09G17420 Oryza brachyantha OB09G17420 I
OB11G11380 Oryza brachyantha OB11G11380 I
OB12G11690 Oryza brachyantha OB12G11690 I
ORGLA04G0150400 Oryza glaberrima ORGLA04G0150400 I
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N
BGIOSGA016726 Oryza indica BGIOSGA016726 I
BGIOSGA017664 Oryza indica BGIOSGA017664 I
BGIOSGA021927 Oryza indica BGIOSGA021927 N
BGIOSGA028751 Oryza indica BGIOSGA028751 I
BGIOSGA030783 Oryza indica BGIOSGA030783 I
BGIOSGA034580 Oryza indica BGIOSGA034580 N
BGIOSGA036704 Oryza indica BGIOSGA036704 N
OLONG_002862 Oryza longistaminata OLONG_002862 N
OLONG_014256 Oryza longistaminata OLONG_014256 I
OMERI01G26790 Oryza meridionalis OMERI01G26790 I
OMERI06G03270 Oryza meridionalis OMERI06G03270 N
OMERI08G13500 Oryza meridionalis OMERI08G13500 N
OMERI09G08520 Oryza meridionalis OMERI09G08520 N
OMERI11G02080 Oryza meridionalis OMERI11G02080 N
OMERI12G00060 Oryza meridionalis OMERI12G00060 N
ONIVA03G39530 Oryza nivara ONIVA03G39530 N
ONIVA06G03970 Oryza nivara ONIVA06G03970 N
ONIVA08G17820 Oryza nivara ONIVA08G17820 N
ONIVA09G10420 Oryza nivara ONIVA09G10420 I
ONIVA11G01800 Oryza nivara ONIVA11G01800 N
OPUNC05G21440 Oryza punctata OPUNC05G21440 I
OPUNC08G14310 Oryza punctata OPUNC08G14310 N
OPUNC09G09320 Oryza punctata OPUNC09G09320 N
OPUNC11G01540 Oryza punctata OPUNC11G01540 N
OPUNC12G01560 Oryza punctata OPUNC12G01560 N
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N
OS04G0504500 Oryza sativa OS04G0504500 I
OS05G0536250 Oryza sativa OS05G0536250 I
OS06G0145700 Oryza sativa OS06G0145700 N
OS08G0442400 Oryza sativa OS08G0442400 I
OS09G0423800 Oryza sativa OS09G0423800 I
OS12G0126300 Oryza sativa OS12G0126300 I
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I
Pavir.J02216 Panicum virgatum Pavir.J02216 I
Pavir.J07914 Panicum virgatum Pavir.J07914 I
Pavir.J08481 Panicum virgatum Pavir.J08481 N
Pavir.J19507 Panicum virgatum Pavir.J19507 N
Pavir.J34675 Panicum virgatum Pavir.J34675 I
Pavir.J34903 Panicum virgatum Pavir.J34903 N
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N
Pm006561 Prunus mume Pm006561 N
Pm008629 Prunus mume Pm008629 I
Pm013856 Prunus mume Pm013856 N
Pm015843 Prunus mume Pm015843 N
Pm015847 Prunus mume Pm015847 N
Pm017032 Prunus mume Pm017032 N
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N
29822.m003477 Ricinus communis 29822.m003477 N
30069.m000440 Ricinus communis 30069.m000440 N
30114.m000507 Ricinus communis 30114.m000507 N
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N
Si007857m.g Setaria italica Si007857m.g N
Si012026m.g Setaria italica Si012026m.g N
Si013842m.g Setaria italica Si013842m.g N
Si022186m.g Setaria italica Si022186m.g I
Si026433m.g Setaria italica Si026433m.g N
Si030129m.g Setaria italica Si030129m.g I
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N
Sb02g025080 Sorghum bicolor Sb02g025080 I
Sb03g037750 Sorghum bicolor Sb03g037750 N
Sb04g025960 Sorghum bicolor Sb04g025960 I
Sb05g001790 Sorghum bicolor Sb05g001790 I
Sb07g021800 Sorghum bicolor Sb07g021800 N
Sb09g026800 Sorghum bicolor Sb09g026800 I
Sb10g003160 Sorghum bicolor Sb10g003160 N
TCM_011797 Theobroma cacao TCM_011797 N
TCM_018386 Theobroma cacao TCM_018386 N
TCM_027569 Theobroma cacao TCM_027569 I
TCM_038442 Theobroma cacao TCM_038442 N
TCM_044588 Theobroma cacao TCM_044588 I
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N
TRIUR3_01982 Triticum urartu TRIUR3_01982 I
TRIUR3_04644 Triticum urartu TRIUR3_04644 N
TRIUR3_24036 Triticum urartu TRIUR3_24036 N
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N
WRI1 Vitis vinifera VIT_13s0047g00340 N
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N
GRMZM2G073982 Zea mays GRMZM2G073982 N
GRMZM2G113078 Zea mays GRMZM2G113078 I
GRMZM2G124524 Zea mays GRMZM2G124524 I
GRMZM2G131266 Zea mays GRMZM2G131266 N
GRMZM2G141219 Zea mays GRMZM2G141219 I
GRMZM2G174834 Zea mays GRMZM2G174834 I
GRMZM2G366434 Zea mays GRMZM2G366434 I
GRMZM2G451031 Zea mays GRMZM2G451031 N