MTR_1g043430 (Medicago truncatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 MTR_1g043430 T041574_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00 		Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365 		0.878 0.788
BHLH104
M06737_2.00 		Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b 		0.878 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES60307 bHLH 91 142

Links

Other bHLH family TFs
Other Medicago truncatula TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I 0.878
BHLH104 Arabidopsis thaliana AT4G14410 D 0.878
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.878
Bo4g126940 Brassica oleracea Bo4g126940 I 0.854
Bra041033 Brassica rapa Bra041033 I 0.874
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.878
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.878
Ca_23174 Cicer arietinum Ca_23174 I 0.914
Cla021854 Citrullus lanatus Cla021854 I 0.869
Cucsa.255290 Cucumis sativus Cucsa.255290 I 0.869
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.878
GLYMA20G22010 Glycine max GLYMA20G22010 I 0.879
GLYMA10G01010 Glycine max GLYMA10G01010 I 0.879
Lus10022186.g Linum usitatissimum Lus10022186.g I 0.868
cassava35418.valid.m1 Manihot esculenta cassava35418.valid.m1 N 0.870
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N 0.846
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N 0.846
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N 0.846
Solyc09g089870.2 Solanum lycopersicum Solyc09g089870.2 N 0.844
PGSC0003DMG400017181 Solanum tuberosum PGSC0003DMG400017181 N 0.844