PGSC0003DMG400027725 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400027725 T043507_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.873 0.860
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400071293 bHLH 44 93

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00011p00235740 Amborella trichopoda AMTR_s00011p00235740 N
Aquca_003_00697 Aquilegia coerulea Aquca_003_00697 N
Aquca_020_00213 Aquilegia coerulea Aquca_020_00213 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
BHLH52 Arabidopsis thaliana AT1G30670 N
BHLH53 Arabidopsis thaliana AT2G34820 N
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
Bo3g028090 Brassica oleracea Bo3g028090 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bra005389 Brassica rapa Bra005389 N
Bra022993 Brassica rapa Bra022993 N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N
Ca_13610 Cicer arietinum Ca_13610 N
Ca_13608 Cicer arietinum Ca_13608 N
Cla020055 Citrullus lanatus Cla020055 N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
Cucsa.167440 Cucumis sativus Cucsa.167440 N
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
Thhalv10009765m.g Eutrema salsugineum Thhalv10009765m.g N
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N
GLYMA08G17747 Glycine max GLYMA08G17747 N
GLYMA15G41400 Glycine max GLYMA15G41400 N
Gorai.005G218900 Gossypium raimondii Gorai.005G218900 N
Gorai.002G107000 Gossypium raimondii Gorai.002G107000 N
Lus10038432.g Linum usitatissimum Lus10038432.g N
Lus10005451.g Linum usitatissimum Lus10005451.g N
MDP0000216053 Malus domestica MDP0000216053 N
MDP0000209483 Malus domestica MDP0000209483 N
MDP0000280921 Malus domestica MDP0000280921 N
cassava27522.m1 Manihot esculenta cassava27522.m1 N
cassava8426.m1 Manihot esculenta cassava8426.m1 N
MTR_1g060700 Medicago truncatula MTR_1g060700 N
MTR_2g067000 Medicago truncatula MTR_2g067000 N
mgf020354m Mimulus guttatus mgf020354m N
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N
Pm010610 Prunus mume Pm010610 N
PRUPE_ppa025945mg Prunus persica PRUPE_ppa025945mg N
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N
27996.m000153 Ricinus communis 27996.m000153 N
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N
Si038598m.g Setaria italica Si038598m.g N
Solyc08g075110.1 Solanum lycopersicum Solyc08g075110.1 N
Solyc08g075090.2 Solanum lycopersicum Solyc08g075090.2 N
PGSC0003DMG400044874 Solanum tuberosum PGSC0003DMG400044874 N
PGSC0003DMG400020812 Solanum tuberosum PGSC0003DMG400020812 N
TCM_033386 Theobroma cacao TCM_033386 N
TCM_027032 Theobroma cacao TCM_027032 N
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N