PGSC0003DMG400039299 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400039299 T043522_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400089728 bHLH 228 271

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02582 Aegilops tauschii F775_02582 N 0.912
F775_02706 Aegilops tauschii F775_02706 N 0.880
F775_27628 Aegilops tauschii F775_27628 N 0.877
AMTR_s00164p00062120 Amborella trichopoda AMTR_s00164p00062120 N 0.912
Aquca_017_00066 Aquilegia coerulea Aquca_017_00066 N 0.912
Aquca_042_00162 Aquilegia coerulea Aquca_042_00162 N 0.912
Aquca_042_00163 Aquilegia coerulea Aquca_042_00163 N 0.912
Al_scaffold_0797_1 Arabidopsis lyrata Al_scaffold_0797_1 N 0.870
RSL4 Arabidopsis lyrata fgenesh2_kg.1__2933__AT1G27740.1 N 0.877
fgenesh2_kg.3__3067__AT2G14760.1 Arabidopsis lyrata fgenesh2_kg.3__3067__AT2G14760.1 N 0.899
RSL2 Arabidopsis lyrata fgenesh2_kg.7__724__AT4G33880.1 N 0.912
fgenesh2_kg.8__503__AT5G43175.1 Arabidopsis lyrata fgenesh2_kg.8__503__AT5G43175.1 N 0.870
BHLH54 Arabidopsis thaliana AT1G27740 N 0.877
AT2G14760 Arabidopsis thaliana AT2G14760 N 0.912
BHLH85 Arabidopsis thaliana AT4G33880 N 0.912
BHLH139 Arabidopsis thaliana AT5G43175 N 0.870
Bostr.15697s0100 Boechera stricta Bostr.15697s0100 N 0.877
Bostr.2199s0029 Boechera stricta Bostr.2199s0029 N 0.912
Bostr.3148s0158 Boechera stricta Bostr.3148s0158 N 0.870
Bostr.7867s1234 Boechera stricta Bostr.7867s1234 N 0.912
BRADI1G14600 Brachypodium distachyon BRADI1G14600 N 0.912
BRADI1G22960 Brachypodium distachyon BRADI1G22960 N 0.880
BRADI1G70860 Brachypodium distachyon BRADI1G70860 N 0.845
BRADI4G03070 Brachypodium distachyon BRADI4G03070 N 0.912
Bo1g007780 Brassica oleracea Bo1g007780 N 0.912
Bo3g142890 Brassica oleracea Bo3g142890 N 0.877
Bo3g169400 Brassica oleracea Bo3g169400 N 0.912
Bo5g052310 Brassica oleracea Bo5g052310 N 0.877
Bo7g048630 Brassica oleracea Bo7g048630 N 0.877
Bo7g116460 Brassica oleracea Bo7g116460 N 0.912
Bra010921 Brassica rapa Bra010921 N 0.877
Bra011476 Brassica rapa Bra011476 N 0.912
Bra030063 Brassica rapa Bra030063 N 0.877
Bra032846 Brassica rapa Bra032846 N 0.877
Bra034587 Brassica rapa Bra034587 N 0.912
Bra036969 Brassica rapa Bra036969 N 0.912
PK01802.1 Cannabis sativa PK01802.1 N 0.912
Cagra.1103s0007 Capsella grandiflora Cagra.1103s0007 N 0.870
Cagra.1305s0010 Capsella grandiflora Cagra.1305s0010 N 0.912
Cagra.1822s0081 Capsella grandiflora Cagra.1822s0081 N 0.877
Cagra.9228s0001 Capsella grandiflora Cagra.9228s0001 N 0.912
Carubv10006623m.g Capsella rubella Carubv10006623m.g N 0.912
Carubv10011072m.g Capsella rubella Carubv10011072m.g N 0.877
Carubv10015484m.g Capsella rubella Carubv10015484m.g N 0.912
Carubv10028625m.g Capsella rubella Carubv10028625m.g N 0.870
evm.TU.supercontig_106.57 Carica papaya evm.TU.supercontig_106.57 N 0.912
evm.TU.supercontig_142.14 Carica papaya evm.TU.supercontig_142.14 N 0.912
Ca_01588 Cicer arietinum Ca_01588 N 0.912
Ca_05644 Cicer arietinum Ca_05644 N 0.912
Ca_11909 Cicer arietinum Ca_11909 N 0.912
Ca_18366 Cicer arietinum Ca_18366 N 0.912
Cla016346 Citrullus lanatus Cla016346 N 0.912
Cla020918 Citrullus lanatus Cla020918 N 0.912
Cla022968 Citrullus lanatus Cla022968 N 0.912
Ciclev10003450m.g Citrus clementina Ciclev10003450m.g N 0.912
Ciclev10030309m.g Citrus clementina Ciclev10030309m.g N 0.912
orange1.1g036928m.g Citrus sinensis orange1.1g036928m.g N 0.912
orange1.1g047654m.g Citrus sinensis orange1.1g047654m.g N 0.912
Cucsa.097490 Cucumis sativus Cucsa.097490 N 0.912
Cucsa.219180 Cucumis sativus Cucsa.219180 N 0.912
Cucsa.352750 Cucumis sativus Cucsa.352750 N 0.912
Eucgr.F02259 Eucalyptus grandis Eucgr.F02259 N 0.914
Eucgr.G01234 Eucalyptus grandis Eucgr.G01234 N 0.914
Eucgr.I01069 Eucalyptus grandis Eucgr.I01069 N 0.912
Thhalv10003393m.g Eutrema salsugineum Thhalv10003393m.g N 0.892
Thhalv10009862m.g Eutrema salsugineum Thhalv10009862m.g N 0.877
Thhalv10026786m.g Eutrema salsugineum Thhalv10026786m.g N 0.912
gene02560-v1.0-hybrid Fragaria vesca gene02560-v1.0-hybrid N 0.912
gene25555-v1.0-hybrid Fragaria vesca gene25555-v1.0-hybrid N 0.877
GLYMA04G04801 Glycine max GLYMA04G04801 N 0.892
GLYMA10G40350 Glycine max GLYMA10G40350 N 0.912
GLYMA10G40360 Glycine max GLYMA10G40360 N 0.912
GLYMA14G09781 Glycine max GLYMA14G09781 N 0.912
GLYMA17G35423 Glycine max GLYMA17G35423 N 0.912
GLYMA20G26980 Glycine max GLYMA20G26980 N 0.912
GLYMA20G26991 Glycine max GLYMA20G26991 N 0.912
Gorai.005G231900 Gossypium raimondii Gorai.005G231900 N 0.912
Gorai.009G219100 Gossypium raimondii Gorai.009G219100 N 0.912
Gorai.010G025400 Gossypium raimondii Gorai.010G025400 N 0.912
MLOC_60270 Hordeum vulgare MLOC_60270 N 0.912
MLOC_67369 Hordeum vulgare MLOC_67369 N 0.847
MLOC_74022 Hordeum vulgare MLOC_74022 N 0.880
MLOC_76486 Hordeum vulgare MLOC_76486 N 0.912
LPERR03G21650 Leersia perrieri LPERR03G21650 N 0.901
LPERR07G17840 Leersia perrieri LPERR07G17840 N 0.912
LPERR11G16970 Leersia perrieri LPERR11G16970 N 0.914
LPERR12G11190 Leersia perrieri LPERR12G11190 N 0.855
LPERR12G14550 Leersia perrieri LPERR12G14550 N 0.912
Lus10001068.g Linum usitatissimum Lus10001068.g N 0.912
Lus10004315.g Linum usitatissimum Lus10004315.g N 0.912
chr1.CM0088.610.nd Lotus japonicus chr1.CM0088.610.nd N 0.912
chr5.CM0096.500.nd Lotus japonicus chr5.CM0096.500.nd N 0.877
chr5.CM0200.480.nc Lotus japonicus chr5.CM0200.480.nc N 0.877
MDP0000131874 Malus domestica MDP0000131874 N 0.859
MDP0000145825 Malus domestica MDP0000145825 N 0.912
MDP0000198037 Malus domestica MDP0000198037 N 0.912
MDP0000573178 Malus domestica MDP0000573178 N 0.912
MDP0000946515 Malus domestica MDP0000946515 N 0.876
cassava14986.m1 Manihot esculenta cassava14986.m1 N 0.912
cassava20440.m1 Manihot esculenta cassava20440.m1 N 0.912
cassava25589.m1 Manihot esculenta cassava25589.m1 N 0.912
cassava38950.m1 Manihot esculenta cassava38950.m1 N 0.912
MTR_1g018090 Medicago truncatula MTR_1g018090 N 0.912
MTR_1g106460 Medicago truncatula MTR_1g106460 N 0.912
MTR_1g106480 Medicago truncatula MTR_1g106480 N 0.912
MTR_3g103030 Medicago truncatula MTR_3g103030 N 0.844
MTR_5g005110 Medicago truncatula MTR_5g005110 N 0.912
mgf018282m Mimulus guttatus mgf018282m N 0.912
mgf019332m Mimulus guttatus mgf019332m N 0.877
mgf022238m Mimulus guttatus mgf022238m N 0.912
mgf024863m Mimulus guttatus mgf024863m N 0.912
GSMUA_Achr2G17130_001 Musa acuminata GSMUA_Achr2G17130_001 N 0.909
GSMUA_Achr3G18870_001 Musa acuminata GSMUA_Achr3G18870_001 N 0.912
GSMUA_Achr4G23240_001 Musa acuminata GSMUA_Achr4G23240_001 N 0.912
GSMUA_Achr6G07760_001 Musa acuminata GSMUA_Achr6G07760_001 N 0.912
GSMUA_Achr6G16890_001 Musa acuminata GSMUA_Achr6G16890_001 N 0.890
GSMUA_Achr9G09600_001 Musa acuminata GSMUA_Achr9G09600_001 N 0.892
GSMUA_AchrUn_randomG07080_001 Musa acuminata GSMUA_AchrUn_randomG07080_001 N 0.888
OBART03G07520 Oryza barthii OBART03G07520 N 0.914
OBART03G26170 Oryza barthii OBART03G26170 N 0.901
OBART12G17400 Oryza barthii OBART12G17400 N 0.912
OB03G17860 Oryza brachyantha OB03G17860 N 0.914
OB03G34210 Oryza brachyantha OB03G34210 N 0.901
OB07G26210 Oryza brachyantha OB07G26210 N 0.912
OB12G24200 Oryza brachyantha OB12G24200 N 0.912
ORGLA03G0073500 Oryza glaberrima ORGLA03G0073500 N 0.914
ORGLA03G0242600 Oryza glaberrima ORGLA03G0242600 N 0.901
ORGLA12G0149000 Oryza glaberrima ORGLA12G0149000 N 0.912
OGLUM03G07680 Oryza glumaepatula OGLUM03G07680 N 0.914
OGLUM03G27050 Oryza glumaepatula OGLUM03G27050 N 0.901
OGLUM07G20330 Oryza glumaepatula OGLUM07G20330 N 0.912
OGLUM09G03740 Oryza glumaepatula OGLUM09G03740 N 0.912
BGIOSGA010239 Oryza indica BGIOSGA010239 N 0.901
BGIOSGA011251 Oryza indica BGIOSGA011251 N 0.914
BGIOSGA023988 Oryza indica BGIOSGA023988 N 0.912
BGIOSGA035917 Oryza indica BGIOSGA035917 N 0.912
OLONG_006157 Oryza longistaminata OLONG_006157 N 0.912
OLONG_008046 Oryza longistaminata OLONG_008046 N 0.914
OLONG_010636 Oryza longistaminata OLONG_010636 N 0.901
OLONG_014997 Oryza longistaminata OLONG_014997 N 0.912
OMERI03G07360 Oryza meridionalis OMERI03G07360 N 0.914
OMERI03G23570 Oryza meridionalis OMERI03G23570 N 0.901
OMERI07G17220 Oryza meridionalis OMERI07G17220 N 0.912
OMERI12G12030 Oryza meridionalis OMERI12G12030 N 0.912
ONIVA03G07980 Oryza nivara ONIVA03G07980 N 0.914
ONIVA03G27180 Oryza nivara ONIVA03G27180 N 0.901
ONIVA07G18960 Oryza nivara ONIVA07G18960 N 0.912
ONIVA12G13790 Oryza nivara ONIVA12G13790 N 0.855
ONIVA12G15960 Oryza nivara ONIVA12G15960 N 0.912
OPUNC03G07300 Oryza punctata OPUNC03G07300 N 0.914
OPUNC03G23870 Oryza punctata OPUNC03G23870 N 0.901
OPUNC07G19390 Oryza punctata OPUNC07G19390 N 0.912
OPUNC12G15720 Oryza punctata OPUNC12G15720 N 0.912
ORUFI03G07580 Oryza rufipogon ORUFI03G07580 N 0.914
ORUFI03G27070 Oryza rufipogon ORUFI03G27070 N 0.901
ORUFI07G21430 Oryza rufipogon ORUFI07G21430 N 0.912
ORUFI12G19280 Oryza rufipogon ORUFI12G19280 N 0.912
OS03G0205300 Oryza sativa OS03G0205300 N 0.914
OS07G0588400 Oryza sativa OS07G0588400 N 0.912
OS12G0589000 Oryza sativa OS12G0589000 N 0.912
Pavir.Ba01059 Panicum virgatum Pavir.Ba01059 N 0.901
Pavir.Bb01173 Panicum virgatum Pavir.Bb01173 N 0.901
Pavir.Ia00352 Panicum virgatum Pavir.Ia00352 N 0.912
Pavir.Ia04640 Panicum virgatum Pavir.Ia04640 N 0.912
Pavir.Ib00696 Panicum virgatum Pavir.Ib00696 N 0.912
Pavir.J00626 Panicum virgatum Pavir.J00626 N 0.912
POPTR_0001s30150 Populus trichocarpa POPTR_0001s30150 N 0.912
POPTR_0002s12000 Populus trichocarpa POPTR_0002s12000 N 0.912
POPTR_0009s09210 Populus trichocarpa POPTR_0009s09210 N 0.912
POPTR_0014s01730 Populus trichocarpa POPTR_0014s01730 N 0.912
Pm005392 Prunus mume Pm005392 N 0.912
Pm021172 Prunus mume Pm021172 N 0.877
PRUPE_ppa015160mg Prunus persica PRUPE_ppa015160mg N 0.912
28152.m000914 Ricinus communis 28152.m000914 N 0.912
30170.m013749 Ricinus communis 30170.m013749 N 0.912
SapurV1A.0005s0400 Salix purpurea SapurV1A.0005s0400 N 0.912
SapurV1A.0019s0320 Salix purpurea SapurV1A.0019s0320 N 0.912
SapurV1A.0476s0200 Salix purpurea SapurV1A.0476s0200 N 0.912
SapurV1A.0845s0110 Salix purpurea SapurV1A.0845s0110 N 0.866
SapurV1A.2301s0020 Salix purpurea SapurV1A.2301s0020 N 0.866
SELMODRAFT_404767 Selaginella moellendorffii SELMODRAFT_404767 N 0.843
SELMODRAFT_419388 Selaginella moellendorffii SELMODRAFT_419388 N 0.843
Si032445m.g Setaria italica Si032445m.g N 0.901
Si039720m.g Setaria italica Si039720m.g N 0.912
Solyc01g107140.1 Solanum lycopersicum Solyc01g107140.1 N 0.912
Solyc04g077960.1 Solanum lycopersicum Solyc04g077960.1 N 0.912
PGSC0003DMG400021526 Solanum tuberosum PGSC0003DMG400021526 N 0.912
PGSC0003DMG400036714 Solanum tuberosum PGSC0003DMG400036714 N 0.912
Sb01g007160 Sorghum bicolor Sb01g007160 N 0.912
Sb02g037990 Sorghum bicolor Sb02g037990 N 0.901
Sb05g025230 Sorghum bicolor Sb05g025230 N 0.914
TCM_007220 Theobroma cacao TCM_007220 N 0.912
TCM_034717 Theobroma cacao TCM_034717 N 0.912
Traes_2AS_9A3F73BE3 Triticum aestivum Traes_2AS_9A3F73BE3 N 0.880
Traes_2BS_659F9ABB9 Triticum aestivum Traes_2BS_659F9ABB9 N 0.880
Traes_2DS_7C9C33E09 Triticum aestivum Traes_2DS_7C9C33E09 N 0.880
Traes_4AL_6A6EC9A6A Triticum aestivum Traes_4AL_6A6EC9A6A N 0.877
Traes_4AS_7530AAEB4 Triticum aestivum Traes_4AS_7530AAEB4 N 0.847
Traes_4BS_9BFCC52AD Triticum aestivum Traes_4BS_9BFCC52AD N 0.877
Traes_4DL_61AE80723 Triticum aestivum Traes_4DL_61AE80723 N 0.847
Traes_4DS_7488F4608 Triticum aestivum Traes_4DS_7488F4608 N 0.877
Traes_5AS_5B9D5E067 Triticum aestivum Traes_5AS_5B9D5E067 N 0.912
Traes_5BS_0F8DBB33D Triticum aestivum Traes_5BS_0F8DBB33D N 0.888
Traes_5DS_51467BEB4 Triticum aestivum Traes_5DS_51467BEB4 N 0.912
TRIUR3_01454 Triticum urartu TRIUR3_01454 N 0.847
TRIUR3_17670 Triticum urartu TRIUR3_17670 N 0.880
TRIUR3_24341 Triticum urartu TRIUR3_24341 N 0.912
VIT_03s0091g00730 Vitis vinifera VIT_03s0091g00730 N 0.912
VIT_18s0001g09210 Vitis vinifera VIT_18s0001g09210 N 0.912
GRMZM2G057260 Zea mays GRMZM2G057260 N 0.901
GRMZM2G383841 Zea mays GRMZM2G383841 N 0.901
GRMZM2G395549 Zea mays GRMZM2G395549 N 0.912