PRUPE_ppa003436mg (Prunus persica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PRUPE_ppa003436mg T043969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8584 		0.912 0.941
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.884 0.961
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.884 0.961
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.884 0.961
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.884 0.961
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.864 0.804
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.864 0.804
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.864 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ12064 bHLH 269 319

Links

Other bHLH family TFs
Other Prunus persica TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_23096 Aegilops tauschii F775_23096 I 0.885
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.912
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.884
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.864
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.884
BIM2 Arabidopsis thaliana AT1G69010 D 0.864
BIM1 Arabidopsis thaliana AT5G08130 D 0.884
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.864
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.884
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.912
BRADI3G56340 Brachypodium distachyon BRADI3G56340 I 0.846
BRADI4G32967 Brachypodium distachyon BRADI4G32967 I 0.885
Bo2g062560 Brassica oleracea Bo2g062560 I 0.864
Bo2g161110 Brassica oleracea Bo2g161110 I 0.884
Bo3g004690 Brassica oleracea Bo3g004690 I 0.884
Bo5g020460 Brassica oleracea Bo5g020460 I 0.884
Bo6g108530 Brassica oleracea Bo6g108530 I 0.864
Bo9g174770 Brassica oleracea Bo9g174770 I 0.884
Bra004355 Brassica rapa Bra004355 I 0.864
Bra005969 Brassica rapa Bra005969 I 0.882
Bra009322 Brassica rapa Bra009322 I 0.884
Bra029354 Brassica rapa Bra029354 I 0.884
Bra038332 Brassica rapa Bra038332 I 0.864
PK00238.1 Cannabis sativa PK00238.1 I 0.864
PK01364.1 Cannabis sativa PK01364.1 I 0.892
PK10562.1 Cannabis sativa PK10562.1 I 0.884
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.864
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.884
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.884
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.864
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.881
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.914
Ca_22043 Cicer arietinum Ca_22043 I 0.864
Cla018818 Citrullus lanatus Cla018818 I 0.872
Cla022382 Citrullus lanatus Cla022382 I 0.894
Ciclev10012135m.g Citrus clementina Ciclev10012135m.g I 0.840
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.914
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.894
orange1.1g019485m.g Citrus sinensis orange1.1g019485m.g I 0.840
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.894
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.914
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.884
Cucsa.174600 Cucumis sativus Cucsa.174600 I 0.864
Cucsa.198520 Cucumis sativus Cucsa.198520 I 0.903
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.894
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.884
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.864
Eucgr.I02069 Eucalyptus grandis Eucgr.I02069 I 0.864
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.884
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.864
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I 0.864
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.894
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.870
GLYMA01G09010 Glycine max GLYMA01G09010 I 0.883
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.894
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.914
GLYMA08G28010 Glycine max GLYMA08G28010 I 0.864
GLYMA17G08980 Glycine max GLYMA17G08980 I 0.903
GLYMA18G51080 Glycine max GLYMA18G51080 I 0.864
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I 0.864
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.871
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I 0.864
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.864
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.864
MLOC_62335 Hordeum vulgare MLOC_62335 I 0.846
LPERR08G15680 Leersia perrieri LPERR08G15680 I 0.888
LPERR09G10080 Leersia perrieri LPERR09G10080 I 0.885
Lus10004630.g Linum usitatissimum Lus10004630.g I 0.864
Lus10007974.g Linum usitatissimum Lus10007974.g I 0.878
Lus10013502.g Linum usitatissimum Lus10013502.g I 0.878
Lus10026684.g Linum usitatissimum Lus10026684.g I 0.864
Lus10034358.g Linum usitatissimum Lus10034358.g I 0.840
MDP0000261293 Malus domestica MDP0000261293 I 0.894
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I 0.864
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I 0.864
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.894
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.914
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.894
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.914
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.914
MTR_5g048350 Medicago truncatula MTR_5g048350 I 0.864
MTR_7g017320 Medicago truncatula MTR_7g017320 I 0.864
mgf001137m Mimulus guttatus mgf001137m I 0.884
mgf005849m Mimulus guttatus mgf005849m I 0.884
mgf011829m Mimulus guttatus mgf011829m I 0.864
mgf013208m Mimulus guttatus mgf013208m I 0.894
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.890
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I 0.878
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.890
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.890
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I 0.902
OBART09G13850 Oryza barthii OBART09G13850 I 0.885
OB02G38020 Oryza brachyantha OB02G38020 I 0.876
OB08G25940 Oryza brachyantha OB08G25940 I 0.912
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I 0.876
ORGLA06G0286200 Oryza glaberrima ORGLA06G0286200 I 0.885
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.912
ORGLA09G0105800 Oryza glaberrima ORGLA09G0105800 I 0.885
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.912
OGLUM09G14430 Oryza glumaepatula OGLUM09G14430 I 0.885
BGIOSGA005697 Oryza indica BGIOSGA005697 I 0.876
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.912
BGIOSGA030958 Oryza indica BGIOSGA030958 I 0.885
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.912
OLONG_020060 Oryza longistaminata OLONG_020060 I 0.885
OMERI09G10560 Oryza meridionalis OMERI09G10560 I 0.885
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.912
ONIVA09G14370 Oryza nivara ONIVA09G14370 I 0.885
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.912
OPUNC09G12310 Oryza punctata OPUNC09G12310 I 0.885
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.912
ORUFI09G14830 Oryza rufipogon ORUFI09G14830 I 0.885
OS02G0726700 Oryza sativa OS02G0726700 I 0.876
OS08G0490000 Oryza sativa OS08G0490000 I 0.912
OS09G0475400 Oryza sativa OS09G0475400 I 0.885
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I 0.876
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I 0.876
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.882
Pavir.J04606 Panicum virgatum Pavir.J04606 I 0.885
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.882
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.912
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.912
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.912
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I 0.864
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.894
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.894
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I 0.871
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.914
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I 0.861
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.894
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I 0.864
29790.m000843 Ricinus communis 29790.m000843 I 0.864
30138.m003899 Ricinus communis 30138.m003899 I 0.894
30138.m003913 Ricinus communis 30138.m003913 I 0.890
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.892
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.894
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.914
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I 0.864
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.914
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I 0.864
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.912
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.912
Si013622m.g Setaria italica Si013622m.g I 0.882
Si016505m.g Setaria italica Si016505m.g I 0.876
Si029604m.g Setaria italica Si029604m.g I 0.885
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.884
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.894
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.894
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.914
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.894
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.894
Sb02g027460 Sorghum bicolor Sb02g027460 I 0.885
Sb04g029270 Sorghum bicolor Sb04g029270 I 0.876
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.882
TCM_011433 Theobroma cacao TCM_011433 I 0.864
TCM_014392 Theobroma cacao TCM_014392 I 0.914
TCM_019015 Theobroma cacao TCM_019015 I 0.864
Traes_5AL_0D4BDDDCD Triticum aestivum Traes_5AL_0D4BDDDCD I 0.885
Traes_5BL_AAC9C7238 Triticum aestivum Traes_5BL_AAC9C7238 I 0.885
Traes_5DL_E96693018 Triticum aestivum Traes_5DL_E96693018 I 0.885
Traes_6BL_DA93728B3 Triticum aestivum Traes_6BL_DA93728B3 I 0.846
Traes_6DL_D38F3257B Triticum aestivum Traes_6DL_D38F3257B I 0.846
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.894
BIM3 Vitis vinifera VIT_14s0083g00930 I 0.864
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.914
GRMZM2G009478 Zea mays GRMZM2G009478 I 0.885
GRMZM2G089501 Zea mays GRMZM2G089501 I 0.885
GRMZM2G317450 Zea mays GRMZM2G317450 I 0.876