CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_146159
(
Sphaerulina musiva
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
SEPMUDRAFT_146159
T044638_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.864
0.745
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.860
0.800
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF17057
bHLH
239
309
KSTSHNVIEKRYRNNLNDKIVELRNSVPSLRAMGRANHGDGNEDLGGLTPAHKLNKATVMAKATEYIKHLE
Links
Other
bHLH
family TFs
Other
Sphaerulina musiva
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.000
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.000
Ca_21138
Cicer arietinum
Ca_21138
N
0.000
Cla018179
Citrullus lanatus
Cla018179
N
0.000
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.000
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.000
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.000
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.000
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.000
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.000
Eucgr.G02939
Eucalyptus grandis
Eucgr.G02939
N
0.000
Eucgr.G02940
Eucalyptus grandis
Eucgr.G02940
N
0.000
Eucgr.G02941
Eucalyptus grandis
Eucgr.G02941
N
0.000
Eucgr.J01244
Eucalyptus grandis
Eucgr.J01244
N
0.000
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.000
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.000
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.000
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.000
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.000
LPERR03G24920
Leersia perrieri
LPERR03G24920
N
0.000
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.000
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.000
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.000
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.000
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.000
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.000
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.000
mgf014897m
Mimulus guttatus
mgf014897m
N
0.000
mgf011165m
Mimulus guttatus
mgf011165m
N
0.000
OBART03G30260
Oryza barthii
OBART03G30260
N
0.000
ORGLA03G0287000
Oryza glaberrima
ORGLA03G0287000
N
0.000
OGLUM03G30480
Oryza glumaepatula
OGLUM03G30480
N
0.000
BGIOSGA010017
Oryza indica
BGIOSGA010017
N
0.000
OMERI03G26460
Oryza meridionalis
OMERI03G26460
N
0.000
ONIVA03G31510
Oryza nivara
ONIVA03G31510
N
0.000
OPUNC03G27510
Oryza punctata
OPUNC03G27510
N
0.000
OS03G0690600
Oryza sativa
OS03G0690600
N
0.000
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.000
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.000
Pm002685
Prunus mume
Pm002685
N
0.000
Pm018822
Prunus mume
Pm018822
N
0.000
PRUPE_ppa021438mg
Prunus persica
PRUPE_ppa021438mg
N
0.000
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.000
27568.m000253
Ricinus communis
27568.m000253
N
0.000
29767.m000200
Ricinus communis
29767.m000200
N
0.000
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.000
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.000
Si034417m.g
Setaria italica
Si034417m.g
N
0.000
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.000
Solyc05g053090.1
Solanum lycopersicum
Solyc05g053090.1
N
0.000
PGSC0003DMG400027198
Solanum tuberosum
PGSC0003DMG400027198
N
0.000
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.000
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.000
PGSC0003DMG400006352
Solanum tuberosum
PGSC0003DMG400006352
N
0.000
Sb01g039670
Sorghum bicolor
Sb01g039670
N
0.000
TCM_042705
Theobroma cacao
TCM_042705
N
0.000
TCM_021920
Theobroma cacao
TCM_021920
N
0.000
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.000
VIT_13s0019g01710
Vitis vinifera
VIT_13s0019g01710
N
0.000
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.000
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.000
GRMZM2G098784
Zea mays
GRMZM2G098784
N
0.000
GRMZM2G049159
Zea mays
GRMZM2G049159
N
0.000