28166.m001054 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 28166.m001054 T047830_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.886 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
28166.m001054 bHLH 75 126

Links

Other bHLH family TFs
Other Ricinus communis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00029p00112130 Amborella trichopoda AMTR_s00029p00112130 N 0.860
AMTR_s00098p00170370 Amborella trichopoda AMTR_s00098p00170370 N 0.849
AMTR_s00009p00175450 Amborella trichopoda AMTR_s00009p00175450 I 0.841
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I 0.878
ILR3 Arabidopsis lyrata fgenesh2_kg.8__1365__AT5G54680.1 I 0.886
ILR3 Arabidopsis thaliana AT5G54680 D 0.886
Bostr.26833s0797 Boechera stricta Bostr.26833s0797 I 0.886
Bo3g021940 Brassica oleracea Bo3g021940 I 0.866
Bra002964 Brassica rapa Bra002964 I 0.886
Bra022738 Brassica rapa Bra022738 I 0.886
Bra029011 Brassica rapa Bra029011 I 0.875
PK23013.1 Cannabis sativa PK23013.1 I 0.914
Cagra.1629s0040 Capsella grandiflora Cagra.1629s0040 I 0.886
Carubv10026758m.g Capsella rubella Carubv10026758m.g I 0.886
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.914
Ca_16355 Cicer arietinum Ca_16355 I 0.914
Ca_06956 Cicer arietinum Ca_06956 I 0.914
Cla001735 Citrullus lanatus Cla001735 I 0.914
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N 0.864
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.914
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.864
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.914
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.914
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.914
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.914
Thhalv10014564m.g Eutrema salsugineum Thhalv10014564m.g I 0.886
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.914
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.914
GLYMA15G06803 Glycine max GLYMA15G06803 I 0.844
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.914
GLYMA12G16560 Glycine max GLYMA12G16560 N 0.856
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.903
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.876
GLYMA15G06860 Glycine max GLYMA15G06860 I 0.844
Gorai.002G016500 Gossypium raimondii Gorai.002G016500 N 0.840
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.856
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.856
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.914
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.914
chr3.CM0155.80.nd Lotus japonicus chr3.CM0155.80.nd N 0.856
MDP0000264803 Malus domestica MDP0000264803 I 0.914
MDP0000323291 Malus domestica MDP0000323291 N 0.853
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.914
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.914
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.914
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.914
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.914
mgf009119m Mimulus guttatus mgf009119m I 0.879
mgf012088m Mimulus guttatus mgf012088m I 0.845
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.870
PDK_20s1322801g004 Phoenix dactylifera PDK_20s1322801g004 N 0.860
fgenesh1_pg.scaffold_13000185 Physcomitrella patens fgenesh1_pg.scaffold_13000185 I 0.885
estExt_gwp_gw1.C_2460032 Physcomitrella patens estExt_gwp_gw1.C_2460032 I 0.885
e_gw1.229.33.1 Physcomitrella patens e_gw1.229.33.1 I 0.885
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.914
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.914
Pm029465 Prunus mume Pm029465 I 0.914
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.911
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.914
SapurV1A.0535s0060 Salix purpurea SapurV1A.0535s0060 N 0.844
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.914
SapurV1A.3390s0010 Salix purpurea SapurV1A.3390s0010 N 0.844
SELMODRAFT_165556 Selaginella moellendorffii SELMODRAFT_165556 I 0.872
SELMODRAFT_165311 Selaginella moellendorffii SELMODRAFT_165311 I 0.872
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.856
TCM_030082 Theobroma cacao TCM_030082 I 0.872
TCM_031118 Theobroma cacao TCM_031118 I 0.914
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I 0.891
VIT_00s0532g00050 Vitis vinifera VIT_00s0532g00050 N 0.860