29883.m001988 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 29883.m001988 T047877_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29883.m001988 bHLH 146 193

Links

Other bHLH family TFs
Other Ricinus communis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04427 Aegilops tauschii F775_04427 N
F775_52433 Aegilops tauschii F775_52433 N
AMTR_s00008p00265010 Amborella trichopoda AMTR_s00008p00265010 N
AMTR_s00036p00178030 Amborella trichopoda AMTR_s00036p00178030 N
AMTR_s00071p00111940 Amborella trichopoda AMTR_s00071p00111940 N
Aquca_001_00189 Aquilegia coerulea Aquca_001_00189 N
Aquca_007_00665 Aquilegia coerulea Aquca_007_00665 N
Aquca_010_00306 Aquilegia coerulea Aquca_010_00306 N
Aquca_022_00317 Aquilegia coerulea Aquca_022_00317 N
fgenesh2_kg.3__2354__AT3G21330.1 Arabidopsis lyrata fgenesh2_kg.3__2354__AT3G21330.1 N
HEC2 Arabidopsis lyrata fgenesh2_kg.5__1376__AT3G50330.1 N
IND1 Arabidopsis lyrata fgenesh2_kg.6__3690__AT4G00120.1 N
HEC3 Arabidopsis lyrata fgenesh2_kg.6__929__AT5G09750.1 N
HEC1 Arabidopsis lyrata fgenesh2_kg.8__2711__AT5G67060.1 N
BHLH87 Arabidopsis thaliana AT3G21330 N
HEC2 Arabidopsis thaliana AT3G50330 N
IND Arabidopsis thaliana AT4G00120 N
HEC3 Arabidopsis thaliana AT5G09750 N
HEC1 Arabidopsis thaliana AT5G67060 N
Bostr.0568s0128 Boechera stricta Bostr.0568s0128 N
Bostr.13129s0018 Boechera stricta Bostr.13129s0018 N
Bostr.14547s0021 Boechera stricta Bostr.14547s0021 N
Bostr.19424s0519 Boechera stricta Bostr.19424s0519 N
Bostr.6864s0212 Boechera stricta Bostr.6864s0212 N
BRADI1G46100 Brachypodium distachyon BRADI1G46100 N
BRADI2G41390 Brachypodium distachyon BRADI2G41390 N
BRADI2G47810 Brachypodium distachyon BRADI2G47810 N
BRADI3G13300 Brachypodium distachyon BRADI3G13300 N
BRADI3G38250 Brachypodium distachyon BRADI3G38250 N
BRADI4G32060 Brachypodium distachyon BRADI4G32060 N
Bo1g084640 Brassica oleracea Bo1g084640 N
Bo2g009510 Brassica oleracea Bo2g009510 N
Bo2g167880 Brassica oleracea Bo2g167880 N
Bo3g054830 Brassica oleracea Bo3g054830 N
Bo3g078540 Brassica oleracea Bo3g078540 N
Bo5g101160 Brassica oleracea Bo5g101160 N
Bo7g064100 Brassica oleracea Bo7g064100 N
Bo8g079710 Brassica oleracea Bo8g079710 N
Bo9g020420 Brassica oleracea Bo9g020420 N
Bo9g173860 Brassica oleracea Bo9g173860 N
Bra000979 Brassica rapa Bra000979 N
Bra001826 Brassica rapa Bra001826 N
Bra012128 Brassica rapa Bra012128 N
Bra028620 Brassica rapa Bra028620 N
Bra030002 Brassica rapa Bra030002 N
Bra031275 Brassica rapa Bra031275 N
Bra036071 Brassica rapa Bra036071 N
Bra036801 Brassica rapa Bra036801 N
Bra037128 Brassica rapa Bra037128 N
PK01043.1 Cannabis sativa PK01043.1 N
PK21140.1 Cannabis sativa PK21140.1 N
Cagra.0706s0009 Capsella grandiflora Cagra.0706s0009 N
Cagra.1085s0086 Capsella grandiflora Cagra.1085s0086 N
Cagra.1261s0004 Capsella grandiflora Cagra.1261s0004 N
Cagra.1757s0024 Capsella grandiflora Cagra.1757s0024 N
Cagra.2428s0003 Capsella grandiflora Cagra.2428s0003 N
Carubv10003163m.g Capsella rubella Carubv10003163m.g N
Carubv10003900m.g Capsella rubella Carubv10003900m.g N
Carubv10013989m.g Capsella rubella Carubv10013989m.g N
Carubv10019056m.g Capsella rubella Carubv10019056m.g N
Carubv10027898m.g Capsella rubella Carubv10027898m.g N
evm.TU.supercontig_131.7 Carica papaya evm.TU.supercontig_131.7 N
evm.TU.supercontig_49.31 Carica papaya evm.TU.supercontig_49.31 N
evm.TU.supercontig_55.142 Carica papaya evm.TU.supercontig_55.142 N
Ca_01550 Cicer arietinum Ca_01550 N
Ca_02154 Cicer arietinum Ca_02154 N
Ca_02767 Cicer arietinum Ca_02767 N
Ca_09282 Cicer arietinum Ca_09282 N
Ca_09667 Cicer arietinum Ca_09667 N
Ca_10121 Cicer arietinum Ca_10121 N
Cla008578 Citrullus lanatus Cla008578 N
Cla015855 Citrullus lanatus Cla015855 N
Cla020499 Citrullus lanatus Cla020499 N
Cla020973 Citrullus lanatus Cla020973 N
Cla022928 Citrullus lanatus Cla022928 N
Ciclev10003815m.g Citrus clementina Ciclev10003815m.g N
Ciclev10013640m.g Citrus clementina Ciclev10013640m.g N
Ciclev10026967m.g Citrus clementina Ciclev10026967m.g N
Ciclev10026976m.g Citrus clementina Ciclev10026976m.g N
orange1.1g020172m.g Citrus sinensis orange1.1g020172m.g N
orange1.1g024139m.g Citrus sinensis orange1.1g024139m.g N
orange1.1g039972m.g Citrus sinensis orange1.1g039972m.g N
orange1.1g043072m.g Citrus sinensis orange1.1g043072m.g N
orange1.1g047850m.g Citrus sinensis orange1.1g047850m.g N
Cucsa.101020 Cucumis sativus Cucsa.101020 N
Cucsa.352300 Cucumis sativus Cucsa.352300 N
Cucsa.360770 Cucumis sativus Cucsa.360770 N
Cucsa.366890 Cucumis sativus Cucsa.366890 N
Cucsa.396050 Cucumis sativus Cucsa.396050 N
Eucgr.F00216 Eucalyptus grandis Eucgr.F00216 N
Eucgr.F03093 Eucalyptus grandis Eucgr.F03093 N
Eucgr.H01682 Eucalyptus grandis Eucgr.H01682 N
Eucgr.H02048 Eucalyptus grandis Eucgr.H02048 N
Eucgr.H04946 Eucalyptus grandis Eucgr.H04946 N
Thhalv10004846m.g Eutrema salsugineum Thhalv10004846m.g N
Thhalv10011068m.g Eutrema salsugineum Thhalv10011068m.g N
Thhalv10015330m.g Eutrema salsugineum Thhalv10015330m.g N
Thhalv10022273m.g Eutrema salsugineum Thhalv10022273m.g N
Thhalv10029526m.g Eutrema salsugineum Thhalv10029526m.g N
gene09115-v1.0-hybrid Fragaria vesca gene09115-v1.0-hybrid N
gene17881-v1.0-hybrid Fragaria vesca gene17881-v1.0-hybrid N
gene22897-v1.0-hybrid Fragaria vesca gene22897-v1.0-hybrid N
gene23830-v1.0-hybrid Fragaria vesca gene23830-v1.0-hybrid N
GLYMA01G39360 Glycine max GLYMA01G39360 N
GLYMA04G04190 Glycine max GLYMA04G04190 N
GLYMA04G39210 Glycine max GLYMA04G39210 N
GLYMA05G19920 Glycine max GLYMA05G19920 N
GLYMA05G32410 Glycine max GLYMA05G32410 N
GLYMA06G04380 Glycine max GLYMA06G04380 N
GLYMA06G15730 Glycine max GLYMA06G15730 N
GLYMA07G01611 Glycine max GLYMA07G01611 N
GLYMA08G16570 Glycine max GLYMA08G16570 N
GLYMA08G21130 Glycine max GLYMA08G21130 N
GLYMA11G05920 Glycine max GLYMA11G05920 N
GLYMA13G42900 Glycine max GLYMA13G42900 N
GLYMA15G02531 Glycine max GLYMA15G02531 N
GLYMA17G19830 Glycine max GLYMA17G19830 N
Gorai.003G025300 Gossypium raimondii Gorai.003G025300 N
Gorai.003G060900 Gossypium raimondii Gorai.003G060900 N
Gorai.007G213700 Gossypium raimondii Gorai.007G213700 N
Gorai.009G212900 Gossypium raimondii Gorai.009G212900 N
Gorai.010G020500 Gossypium raimondii Gorai.010G020500 N
Gorai.011G069200 Gossypium raimondii Gorai.011G069200 N
Gorai.011G116100 Gossypium raimondii Gorai.011G116100 N
MLOC_16429 Hordeum vulgare MLOC_16429 N
MLOC_4332 Hordeum vulgare MLOC_4332 N
LPERR01G17090 Leersia perrieri LPERR01G17090 N
LPERR01G24260 Leersia perrieri LPERR01G24260 N
LPERR05G20190 Leersia perrieri LPERR05G20190 N
LPERR06G06410 Leersia perrieri LPERR06G06410 N
LPERR08G01030 Leersia perrieri LPERR08G01030 N
LPERR08G14680 Leersia perrieri LPERR08G14680 N
LPERR09G09120 Leersia perrieri LPERR09G09120 N
Lus10003500.g Linum usitatissimum Lus10003500.g N
Lus10005710.g Linum usitatissimum Lus10005710.g N
Lus10009745.g Linum usitatissimum Lus10009745.g N
Lus10012670.g Linum usitatissimum Lus10012670.g N
Lus10033488.g Linum usitatissimum Lus10033488.g N
Lus10042647.g Linum usitatissimum Lus10042647.g N
chr3.CM1570.150.nc Lotus japonicus chr3.CM1570.150.nc N
LjSGA_011209.1 Lotus japonicus LjSGA_011209.1 N
LjT10C23.20.nc Lotus japonicus LjT10C23.20.nc N
MDP0000123893 Malus domestica MDP0000123893 N
MDP0000123894 Malus domestica MDP0000123894 N
MDP0000145937 Malus domestica MDP0000145937 N
MDP0000166245 Malus domestica MDP0000166245 N
MDP0000249405 Malus domestica MDP0000249405 N
MDP0000420192 Malus domestica MDP0000420192 N
MDP0000711774 Malus domestica MDP0000711774 N
cassava15224.m1 Manihot esculenta cassava15224.m1 N
cassava2779.m1 Manihot esculenta cassava2779.m1 N
cassava34914.m1 Manihot esculenta cassava34914.m1 N
cassava41909.m1 Manihot esculenta cassava41909.m1 N
cassava45275.m1 Manihot esculenta cassava45275.m1 N
cassava5871.m1 Manihot esculenta cassava5871.m1 N
cassava8495.m1 Manihot esculenta cassava8495.m1 N
MTR_2g100490 Medicago truncatula MTR_2g100490 N
MTR_3g101810 Medicago truncatula MTR_3g101810 N
MTR_5g017210 Medicago truncatula MTR_5g017210 N
MTR_8g015450 Medicago truncatula MTR_8g015450 N
MTR_8g093500 Medicago truncatula MTR_8g093500 N
mg018414m Mimulus guttatus mg018414m N
mgf016799m Mimulus guttatus mgf016799m N
mgf019142m Mimulus guttatus mgf019142m N
mgf023933m Mimulus guttatus mgf023933m N
GSMUA_Achr10G25590_001 Musa acuminata GSMUA_Achr10G25590_001 N
GSMUA_Achr11G19510_001 Musa acuminata GSMUA_Achr11G19510_001 N
GSMUA_Achr1G14400_001 Musa acuminata GSMUA_Achr1G14400_001 N
GSMUA_Achr3G25950_001 Musa acuminata GSMUA_Achr3G25950_001 N
GSMUA_Achr5G01290_001 Musa acuminata GSMUA_Achr5G01290_001 N
GSMUA_Achr6G18580_001 Musa acuminata GSMUA_Achr6G18580_001 N
GSMUA_Achr7G23410_001 Musa acuminata GSMUA_Achr7G23410_001 N
GSMUA_Achr8G23350_001 Musa acuminata GSMUA_Achr8G23350_001 N
GSMUA_Achr8G24970_001 Musa acuminata GSMUA_Achr8G24970_001 N
GSMUA_Achr9G15380_001 Musa acuminata GSMUA_Achr9G15380_001 N
GSMUA_Achr9G29130_001 Musa acuminata GSMUA_Achr9G29130_001 N
GSMUA_AchrUn_randomG11120_001 Musa acuminata GSMUA_AchrUn_randomG11120_001 N
OBART01G19850 Oryza barthii OBART01G19850 N
OBART01G28250 Oryza barthii OBART01G28250 N
OBART05G24340 Oryza barthii OBART05G24340 N
OB01G37310 Oryza brachyantha OB01G37310 N
OB08G10720 Oryza brachyantha OB08G10720 N
ORGLA01G0163600 Oryza glaberrima ORGLA01G0163600 N
ORGLA01G0233600 Oryza glaberrima ORGLA01G0233600 N
ORGLA05G0208300 Oryza glaberrima ORGLA05G0208300 N
ORGLA06G0065500 Oryza glaberrima ORGLA06G0065500 N
ORGLA08G0155700 Oryza glaberrima ORGLA08G0155700 N
ORGLA08G0237200 Oryza glaberrima ORGLA08G0237200 N
ORGLA09G0096500 Oryza glaberrima ORGLA09G0096500 N
OGLUM01G23470 Oryza glumaepatula OGLUM01G23470 N
OGLUM01G32180 Oryza glumaepatula OGLUM01G32180 N
OGLUM05G25760 Oryza glumaepatula OGLUM05G25760 N
OGLUM08G00660 Oryza glumaepatula OGLUM08G00660 N
OGLUM08G18600 Oryza glumaepatula OGLUM08G18600 N
OGLUM09G13100 Oryza glumaepatula OGLUM09G13100 N
BGIOSGA000939 Oryza indica BGIOSGA000939 N
BGIOSGA001389 Oryza indica BGIOSGA001389 N
BGIOSGA020285 Oryza indica BGIOSGA020285 N
BGIOSGA022533 Oryza indica BGIOSGA022533 N
BGIOSGA026828 Oryza indica BGIOSGA026828 N
BGIOSGA027780 Oryza indica BGIOSGA027780 N
BGIOSGA030896 Oryza indica BGIOSGA030896 N
OLONG_008667 Oryza longistaminata OLONG_008667 N
OMERI01G18460 Oryza meridionalis OMERI01G18460 N
OMERI05G07470 Oryza meridionalis OMERI05G07470 N
OMERI05G21560 Oryza meridionalis OMERI05G21560 N
OMERI06G08170 Oryza meridionalis OMERI06G08170 N
OMERI08G00980 Oryza meridionalis OMERI08G00980 N
OMERI09G10060 Oryza meridionalis OMERI09G10060 N
ONIVA01G07440 Oryza nivara ONIVA01G07440 N
ONIVA01G32170 Oryza nivara ONIVA01G32170 N
ONIVA03G20840 Oryza nivara ONIVA03G20840 N
ONIVA05G25380 Oryza nivara ONIVA05G25380 N
ONIVA08G00590 Oryza nivara ONIVA08G00590 N
ONIVA08G19790 Oryza nivara ONIVA08G19790 N
OPUNC01G20250 Oryza punctata OPUNC01G20250 N
OPUNC01G28050 Oryza punctata OPUNC01G28050 N
OPUNC05G21740 Oryza punctata OPUNC05G21740 N
OPUNC06G06640 Oryza punctata OPUNC06G06640 N
OPUNC08G00600 Oryza punctata OPUNC08G00600 N
OPUNC08G15570 Oryza punctata OPUNC08G15570 N
OPUNC09G11020 Oryza punctata OPUNC09G11020 N
ORUFI01G31350 Oryza rufipogon ORUFI01G31350 N
ORUFI05G25940 Oryza rufipogon ORUFI05G25940 N
ORUFI06G07280 Oryza rufipogon ORUFI06G07280 N
ORUFI08G00650 Oryza rufipogon ORUFI08G00650 N
ORUFI08G19930 Oryza rufipogon ORUFI08G19930 N
ORUFI09G13650 Oryza rufipogon ORUFI09G13650 N
OS01G0566800 Oryza sativa OS01G0566800 N
OS01G0707500 Oryza sativa OS01G0707500 N
OS05G0541400 Oryza sativa OS05G0541400 N
OS08G0108500 Oryza sativa OS08G0108500 N
OS09G0455300 Oryza sativa OS09G0455300 N
Pavir.Ba02034 Panicum virgatum Pavir.Ba02034 N
Pavir.Ca00715 Panicum virgatum Pavir.Ca00715 N
Pavir.Ea01618 Panicum virgatum Pavir.Ea01618 N
Pavir.Eb02113 Panicum virgatum Pavir.Eb02113 N
Pavir.Eb02901 Panicum virgatum Pavir.Eb02901 N
Pavir.Fa00680 Panicum virgatum Pavir.Fa00680 N
Pavir.Fa02152 Panicum virgatum Pavir.Fa02152 N
Pavir.Fb01689 Panicum virgatum Pavir.Fb01689 N
Pavir.J20328 Panicum virgatum Pavir.J20328 N
Pavir.J21430 Panicum virgatum Pavir.J21430 N
Pavir.J21912 Panicum virgatum Pavir.J21912 N
Pavir.J39499 Panicum virgatum Pavir.J39499 N
estExt_fgenesh1_pg.C_1630065 Physcomitrella patens estExt_fgenesh1_pg.C_1630065 N
estExt_fgenesh1_pg.C_480124 Physcomitrella patens estExt_fgenesh1_pg.C_480124 N
estExt_fgenesh1_pg.C_550008 Physcomitrella patens estExt_fgenesh1_pg.C_550008 N
estExt_fgenesh1_pg.C_980121 Physcomitrella patens estExt_fgenesh1_pg.C_980121 N
fgenesh1_pg.scaffold_273000011 Physcomitrella patens fgenesh1_pg.scaffold_273000011 N
gw1.67.189.1 Physcomitrella patens gw1.67.189.1 N
POPTR_0001s19250 Populus trichocarpa POPTR_0001s19250 N
POPTR_0002s12660 Populus trichocarpa POPTR_0002s12660 N
POPTR_0005s06220 Populus trichocarpa POPTR_0005s06220 N
POPTR_0005s18210 Populus trichocarpa POPTR_0005s18210 N
XM_002310473.1 Populus trichocarpa POPTR_0007s03950 N
POPTR_0007s10950 Populus trichocarpa POPTR_0007s10950 N
POPTR_0014s02720 Populus trichocarpa POPTR_0014s02720 N
Pm001707 Prunus mume Pm001707 N
Pm005293 Prunus mume Pm005293 N
Pm026380 Prunus mume Pm026380 N
Pm030884 Prunus mume Pm030884 N
PRUPE_ppa015446mg Prunus persica PRUPE_ppa015446mg N
PRUPE_ppa021226mg Prunus persica PRUPE_ppa021226mg N
PRUPE_ppa021410mg Prunus persica PRUPE_ppa021410mg N
PRUPE_ppa022938mg Prunus persica PRUPE_ppa022938mg N
30115.m001220 Ricinus communis 30115.m001220 N
30136.m001043 Ricinus communis 30136.m001043 N
30146.m003443 Ricinus communis 30146.m003443 N
30170.m013861 Ricinus communis 30170.m013861 N
SapurV1A.0167s0080 Salix purpurea SapurV1A.0167s0080 N
SapurV1A.0352s0020 Salix purpurea SapurV1A.0352s0020 N
SapurV1A.0423s0010 Salix purpurea SapurV1A.0423s0010 N
SapurV1A.0550s0030 Salix purpurea SapurV1A.0550s0030 N
SapurV1A.0623s0130 Salix purpurea SapurV1A.0623s0130 N
SapurV1A.2123s0040 Salix purpurea SapurV1A.2123s0040 N
SapurV1A.2172s0010 Salix purpurea SapurV1A.2172s0010 N
SELMODRAFT_405220 Selaginella moellendorffii SELMODRAFT_405220 N
SELMODRAFT_415047 Selaginella moellendorffii SELMODRAFT_415047 N
Si001743m.g Setaria italica Si001743m.g N
Si003753m.g Setaria italica Si003753m.g N
Si015197m.g Setaria italica Si015197m.g N
Si015349m.g Setaria italica Si015349m.g N
Si030966m.g Setaria italica Si030966m.g N
Solyc02g090950.1 Solanum lycopersicum Solyc02g090950.1 N
Solyc03g121240.1 Solanum lycopersicum Solyc03g121240.1 N
Solyc04g078790.2 Solanum lycopersicum Solyc04g078790.2 N
Solyc11g005780.1 Solanum lycopersicum Solyc11g005780.1 N
Solyc12g088790.1 Solanum lycopersicum Solyc12g088790.1 N
PGSC0003DMG400004039 Solanum tuberosum PGSC0003DMG400004039 N
PGSC0003DMG400007964 Solanum tuberosum PGSC0003DMG400007964 N
PGSC0003DMG400018986 Solanum tuberosum PGSC0003DMG400018986 N
PGSC0003DMG400028657 Solanum tuberosum PGSC0003DMG400028657 N
Sb02g026530 Sorghum bicolor Sb02g026530 N
Sb03g025570 Sorghum bicolor Sb03g025570 N
Sb03g032520 Sorghum bicolor Sb03g032520 N
Sb07g000900 Sorghum bicolor Sb07g000900 N
Sb07g000910 Sorghum bicolor Sb07g000910 N
Sb07g022920 Sorghum bicolor Sb07g022920 N
Sb09g027030 Sorghum bicolor Sb09g027030 N
TCM_000632 Theobroma cacao TCM_000632 N
TCM_001435 Theobroma cacao TCM_001435 N
TCM_028961 Theobroma cacao TCM_028961 N
TCM_033818 Theobroma cacao TCM_033818 N
TRAES3BF075800010CFD_g Triticum aestivum TRAES3BF075800010CFD_g N
TRAES3BF276900020CFD_g Triticum aestivum TRAES3BF276900020CFD_g N
Traes_5BL_DDC2491F7 Triticum aestivum Traes_5BL_DDC2491F7 N
Traes_6AS_C1A37E015 Triticum aestivum Traes_6AS_C1A37E015 N
Traes_7DL_F43F7A9A3 Triticum aestivum Traes_7DL_F43F7A9A3 N
TRIUR3_19098 Triticum urartu TRIUR3_19098 N
TRIUR3_19402 Triticum urartu TRIUR3_19402 N
TRIUR3_28638 Triticum urartu TRIUR3_28638 N
HEC3 Vitis vinifera VIT_04s0044g01040 N
VIT_07s0031g00550 Vitis vinifera VIT_07s0031g00550 N
VIT_09s0002g02700 Vitis vinifera VIT_09s0002g02700 N
VIT_18s0001g10400 Vitis vinifera VIT_18s0001g10400 N
GRMZM2G081816 Zea mays GRMZM2G081816 N
GRMZM2G111666 Zea mays GRMZM2G111666 N
GRMZM2G134735 Zea mays GRMZM2G134735 N
GRMZM2G164341 Zea mays GRMZM2G164341 N
GRMZM2G354618 Zea mays GRMZM2G354618 N
GRMZM2G414252 Zea mays GRMZM2G414252 N
GRMZM2G471635 Zea mays GRMZM2G471635 N
GRMZM5G812883 Zea mays GRMZM5G812883 N
GRMZM5G817854 Zea mays GRMZM5G817854 N
GRMZM5G818776 Zea mays GRMZM5G818776 N