CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000018723
(
Astyanax mexicanus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSAMXG00000018723
T058992_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.849
0.836
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.849
0.836
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.849
0.836
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.849
0.836
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.849
0.836
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.849
0.836
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.849
0.836
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.849
0.836
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.849
0.836
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.849
0.836
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.849
0.836
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.849
0.836
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.849
0.836
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.849
0.836
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.849
0.836
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.849
0.836
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.849
0.836
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.849
0.836
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.849
0.836
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.849
0.836
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.849
0.836
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.849
0.836
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.849
0.836
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.849
0.836
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.849
0.836
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.849
0.836
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.795
0.738
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.795
0.738
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.795
0.738
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.795
0.738
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.795
0.738
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.795
0.738
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.795
0.738
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.795
0.738
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.795
0.738
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.795
0.738
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.795
0.738
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.795
0.738
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.795
0.738
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.795
0.738
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.783
0.721
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY
RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.783
0.721
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.783
0.721
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.783
0.721
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.783
0.721
CEBPE
M09927_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.783
0.721
CEBPE
M09928_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.783
0.721
CEBPE
M09929_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.783
0.721
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.783
0.721
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA
TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.782
0.721
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.782
0.721
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000019278
bZIP
224
284
DEYRQRRERNNLAVRKSRDKAKMRNMETQHKVLELAAENDRLQKRVEQLSRELATLRNLLS
Links
Other
bZIP
family TFs
Other
Astyanax mexicanus
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05429
Aegilops tauschii
F775_05429
I
0.000
HY5
Arabidopsis lyrata
scaffold_601144.1
I
0.000
HY5
Arabidopsis thaliana
AT5G11260
D
0.000
Bostr.23997s0021
Boechera stricta
Bostr.23997s0021
I
0.000
Bostr.29827s0269
Boechera stricta
Bostr.29827s0269
I
0.000
BRADI1G36750
Brachypodium distachyon
BRADI1G36750
I
0.000
BRADI3G07540
Brachypodium distachyon
BRADI3G07540
I
0.000
Bo2g010330
Brassica oleracea
Bo2g010330
I
0.000
Bo9g171430
Brassica oleracea
Bo9g171430
I
0.000
Bra008976
Brassica rapa
Bra008976
I
0.000
Bra023317
Brassica rapa
Bra023317
I
0.000
PK17235.1
Cannabis sativa
PK17235.1
I
0.000
Cagra.7526s0027
Capsella grandiflora
Cagra.7526s0027
I
0.000
Carubv10003520m.g
Capsella rubella
Carubv10003520m.g
I
0.000
evm.TU.supercontig_115.9
Carica papaya
evm.TU.supercontig_115.9
I
0.000
Ca_21380
Cicer arietinum
Ca_21380
I
0.000
Ca_22618
Cicer arietinum
Ca_22618
I
0.000
Cla021273
Citrullus lanatus
Cla021273
I
0.000
Cla022656
Citrullus lanatus
Cla022656
I
0.000
Ciclev10009720m.g
Citrus clementina
Ciclev10009720m.g
I
0.000
orange1.1g030957m.g
Citrus sinensis
orange1.1g030957m.g
I
0.000
Cucsa.162360
Cucumis sativus
Cucsa.162360
I
0.000
Cucsa.310450
Cucumis sativus
Cucsa.310450
I
0.000
Eucgr.B02198
Eucalyptus grandis
Eucgr.B02198
I
0.000
Eucgr.C02802
Eucalyptus grandis
Eucgr.C02802
I
0.000
Thhalv10004860m.g
Eutrema salsugineum
Thhalv10004860m.g
I
0.000
Thhalv10014851m.g
Eutrema salsugineum
Thhalv10014851m.g
I
0.000
gene11666-v1.0-hybrid
Fragaria vesca
gene11666-v1.0-hybrid
I
0.000
GLYMA08G41450
Glycine max
GLYMA08G41450
I
0.000
GLYMA18G14750
Glycine max
GLYMA18G14750
I
0.000
Q39895_SOYBN
Glycine max
Q39895_SOYBN
D
0.000
Gorai.004G274100
Gossypium raimondii
Gorai.004G274100
I
0.000
LPERR02G06800
Leersia perrieri
LPERR02G06800
I
0.000
LPERR06G16860
Leersia perrieri
LPERR06G16860
I
0.000
Lus10002028.g
Linum usitatissimum
Lus10002028.g
I
0.000
Lus10002900.g
Linum usitatissimum
Lus10002900.g
I
0.000
chr6.LjT14A08.90.nd
Lotus japonicus
chr6.LjT14A08.90.nd
I
0.000
LjB12O06.40.nc
Lotus japonicus
LjB12O06.40.nc
I
0.000
MDP0000264514
Malus domestica
MDP0000264514
I
0.000
MDP0000586302
Malus domestica
MDP0000586302
I
0.000
cassava8163.valid.m1
Manihot esculenta
cassava8163.valid.m1
I
0.000
MTR_3g436010
Medicago truncatula
MTR_3g436010
I
0.000
MTR_7g057160
Medicago truncatula
MTR_7g057160
I
0.000
SAR_estExt_Genewise1Plus.C_20674
Micromonas pusilla
SAR_estExt_Genewise1Plus.C_20674
I
0.000
EuGene.0200010492
Micromonas sp RCC299
EuGene.0200010492
I
0.000
mgf012104m
Mimulus guttatus
mgf012104m
I
0.000
mgf014305m
Mimulus guttatus
mgf014305m
I
0.000
GSMUA_Achr10G27050_001
Musa acuminata
GSMUA_Achr10G27050_001
I
0.000
GSMUA_Achr5G06060_001
Musa acuminata
GSMUA_Achr5G06060_001
I
0.000
GSMUA_Achr6G05280_001
Musa acuminata
GSMUA_Achr6G05280_001
I
0.000
GSMUA_Achr7G09980_001
Musa acuminata
GSMUA_Achr7G09980_001
I
0.000
GSMUA_Achr9G28570_001
Musa acuminata
GSMUA_Achr9G28570_001
I
0.000
OBART02G07840
Oryza barthii
OBART02G07840
I
0.000
OBART06G20230
Oryza barthii
OBART06G20230
I
0.000
OBART06G20240
Oryza barthii
OBART06G20240
I
0.000
OB02G17160
Oryza brachyantha
OB02G17160
I
0.000
ORGLA02G0074000
Oryza glaberrima
ORGLA02G0074000
I
0.000
OGLUM02G07920
Oryza glumaepatula
OGLUM02G07920
I
0.000
OGLUM06G21280
Oryza glumaepatula
OGLUM06G21280
I
0.000
BGIOSGA002286
Oryza indica
BGIOSGA002286
I
0.000
BGIOSGA006916
Oryza indica
BGIOSGA006916
I
0.000
BGIOSGA023213
Oryza indica
BGIOSGA023213
I
0.000
OLONG_013539
Oryza longistaminata
OLONG_013539
I
0.000
OLONG_023968
Oryza longistaminata
OLONG_023968
I
0.000
OMERI06G20830
Oryza meridionalis
OMERI06G20830
I
0.000
ONIVA02G09400
Oryza nivara
ONIVA02G09400
I
0.000
OPUNC02G07060
Oryza punctata
OPUNC02G07060
I
0.000
OPUNC06G18440
Oryza punctata
OPUNC06G18440
I
0.000
ORUFI03G26360
Oryza rufipogon
ORUFI03G26360
I
0.000
OS02G0203000
Oryza sativa
OS02G0203000
I
0.000
OS06G0601500
Oryza sativa
OS06G0601500
I
0.000
Pavir.Aa02966
Panicum virgatum
Pavir.Aa02966
I
0.000
Pavir.Ab00856
Panicum virgatum
Pavir.Ab00856
I
0.000
Pavir.Da00549
Panicum virgatum
Pavir.Da00549
I
0.000
Pavir.Db01231
Panicum virgatum
Pavir.Db01231
I
0.000
e_gw1.80.85.1
Physcomitrella patens
e_gw1.80.85.1
I
0.000
POPTR_0006s26800
Populus trichocarpa
POPTR_0006s26800
I
0.000
POPTR_0018s01530
Populus trichocarpa
POPTR_0018s01530
I
0.000
Pm007163
Prunus mume
Pm007163
I
0.000
PRUPE_ppa011967mg
Prunus persica
PRUPE_ppa011967mg
I
0.000
PRUPE_ppa012064mg
Prunus persica
PRUPE_ppa012064mg
I
0.000
29848.m004650
Ricinus communis
29848.m004650
I
0.000
SapurV1A.0043s0530
Salix purpurea
SapurV1A.0043s0530
I
0.000
SapurV1A.0073s0400
Salix purpurea
SapurV1A.0073s0400
I
0.000
SapurV1A.3812s0010
Salix purpurea
SapurV1A.3812s0010
I
0.000
SELMODRAFT_173274
Selaginella moellendorffii
SELMODRAFT_173274
I
0.000
SELMODRAFT_440988
Selaginella moellendorffii
SELMODRAFT_440988
I
0.000
SELMODRAFT_451326
Selaginella moellendorffii
SELMODRAFT_451326
I
0.000
SELMODRAFT_451330
Selaginella moellendorffii
SELMODRAFT_451330
I
0.000
Si018524m.g
Setaria italica
Si018524m.g
I
0.000
Solyc08g061130.2
Solanum lycopersicum
Solyc08g061130.2
I
0.000
PGSC0003DMG401020784
Solanum tuberosum
PGSC0003DMG401020784
I
0.000
Sb04g007060
Sorghum bicolor
Sb04g007060
I
0.000
Sb10g023420
Sorghum bicolor
Sb10g023420
I
0.000
TCM_038392
Theobroma cacao
TCM_038392
I
0.000
Traes_6AS_AFF47E71C
Triticum aestivum
Traes_6AS_AFF47E71C
I
0.000
Traes_6BS_993CBD840
Triticum aestivum
Traes_6BS_993CBD840
I
0.000
Traes_6DS_F8DFD036F
Triticum aestivum
Traes_6DS_F8DFD036F
I
0.000
Traes_7DL_68B814464
Triticum aestivum
Traes_7DL_68B814464
I
0.000
TRIUR3_25965
Triticum urartu
TRIUR3_25965
I
0.000
HY5
Vitis vinifera
VIT_04s0008g05210
I
0.000
GRMZM2G137046
Zea mays
GRMZM2G137046
I
0.000
GRMZM2G140355
Zea mays
GRMZM2G140355
I
0.000