BATF3 (Gorilla gorilla)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSGGOG00000023446 T059909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.880 1.000
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.880 1.000
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.880 1.000
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.880 1.000
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.880 1.000
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.880 1.000
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.880 1.000
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.880 1.000
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.880 1.000
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.831 0.859
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.826 0.641
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.826 0.641
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.814 0.625
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.814 0.625
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.814 0.625
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.814 0.625
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.814 0.625
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.814 0.625
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.814 0.625
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.814 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000026278 bZIP 24 93

Links

Other bZIP family TFs
Other Gorilla gorilla TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MBD4 Arabidopsis thaliana AT3G63030 N
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N
Bo4g098290 Brassica oleracea Bo4g098290 N
Bo8g098350 Brassica oleracea Bo8g098350 N
Bra007723 Brassica rapa Bra007723 N
Bra040421 Brassica rapa Bra040421 N
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N
Carubv10018085m.g Capsella rubella Carubv10018085m.g N
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N
GLYMA10G02860 Glycine max GLYMA10G02860 N
GLYMA02G16930 Glycine max GLYMA02G16930 N
Lus10008176.g Linum usitatissimum Lus10008176.g N
Lus10042674.g Linum usitatissimum Lus10042674.g N
Lus10029631.g Linum usitatissimum Lus10029631.g N
Lus10027980.g Linum usitatissimum Lus10027980.g N
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N
29703.m001533 Ricinus communis 29703.m001533 N
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N
SapurV1A.0135s0370 Salix purpurea SapurV1A.0135s0370 N
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N