SMAR010009 (Strigamia maritima)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 SMAR010009 T068119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.845 0.852
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.845 0.852
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.845 0.852
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.845 0.852
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.845 0.852
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.845 0.852
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.845 0.852
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.845 0.852
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.845 0.852
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.845 0.852
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.845 0.852
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.845 0.852
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.845 0.852
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.845 0.852
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.845 0.852
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.845 0.852
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.845 0.852
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.845 0.852
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.845 0.852
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.845 0.852
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.845 0.852
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.845 0.852
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.845 0.852
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.845 0.852
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.835 0.770
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.835 0.770
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.835 0.770
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.835 0.770
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.835 0.770
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.827 0.869
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.827 0.869
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.824 0.754
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.824 0.754
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.824 0.754
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.822 0.852
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.822 0.852
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.821 0.721
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.821 0.721
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.821 0.721
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.821 0.721
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.821 0.721
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR010009-PA bZIP 303 363

Links

Other bZIP family TFs
Other Strigamia maritima TFs

358 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.000
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.000
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.000
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.000
ASIL1 Arabidopsis thaliana AT1G54060 D 0.000
ASIL2 Arabidopsis thaliana AT3G14180 D 0.000
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.000
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.000
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.000
Bo6g050870 Brassica oleracea Bo6g050870 I 0.000
Bo6g033010 Brassica oleracea Bo6g033010 I 0.000
Bo3g184450 Brassica oleracea Bo3g184450 I 0.000
Bo1g134590 Brassica oleracea Bo1g134590 I 0.000
Bra021536 Brassica rapa Bra021536 I 0.000
Bra037960 Brassica rapa Bra037960 I 0.000
Bra021534 Brassica rapa Bra021534 I 0.000
Bra014370 Brassica rapa Bra014370 I 0.000
PK22475.1 Cannabis sativa PK22475.1 N 0.000
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.000
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.000
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.000
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.000
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.000
Cla015773 Citrullus lanatus Cla015773 I 0.000
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.000
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.000
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.000
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.000
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.000
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.000
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.000
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.000
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
MDP0000281471 Malus domestica MDP0000281471 I 0.000
MDP0000255104 Malus domestica MDP0000255104 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.000
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.000
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.000
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.000
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.000
Pm013209 Prunus mume Pm013209 I 0.000
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.000
29727.m000472 Ricinus communis 29727.m000472 I 0.000
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.000
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.000
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.000
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.000
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.000
TCM_029209 Theobroma cacao TCM_029209 I 0.000