CGI_10023711 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10023711 T083593_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.789 0.842
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.789 0.842
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.789 0.842
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.789 0.842
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.782 0.860
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.782 0.860
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.782 0.860
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.782 0.860
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.780 0.833
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.780 0.833
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.780 0.833
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.771 0.816
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.771 0.816
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.771 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC40277 C2H2 ZF 144 166
EKC40277 C2H2 ZF 175 197
EKC40277 C2H2 ZF 201 223
EKC40277 C2H2 ZF 229 251
EKC40277 C2H2 ZF 257 278

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g07581 Acanthocheilonema viteae nAv.1.0.1.g07581 N 0.761
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.780
AAEL005176 Aedes aegypti AAEL005176 I 0.787
AAEL009230 Aedes aegypti AAEL009230 I 0.776
AAEL014359 Aedes aegypti AAEL014359 I 0.776
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.782
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.806
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.800
AATE010651 Anopheles atroparvus AATE010651 I 0.776
AATE020159 Anopheles atroparvus AATE020159 I 0.787
ACHR010032 Anopheles christyi ACHR010032 I 0.787
ACOM031677 Anopheles coluzzii ACOM031677 I 0.776
ACOM031685 Anopheles coluzzii ACOM031685 I 0.787
ACUA003488 Anopheles culicifacies ACUA003488 I 0.776
ACUA020861 Anopheles culicifacies ACUA020861 I 0.776
ACUA022497 Anopheles culicifacies ACUA022497 I 0.787
AFAF007486 Anopheles farauti AFAF007486 I 0.787
AFAF017001 Anopheles farauti AFAF017001 I 0.776
AFUN001835 Anopheles funestus AFUN001835 I 0.776
AFUN002786 Anopheles funestus AFUN002786 I 0.787
AGAP006791 Anopheles gambiae AGAP006791 I 0.787
AGAP006794 Anopheles gambiae AGAP006794 I 0.776
AMEC013076 Anopheles melas AMEC013076 I 0.787
AMEC015586 Anopheles melas AMEC015586 I 0.776
AMEM013788 Anopheles merus AMEM013788 I 0.787
AMEM017035 Anopheles merus AMEM017035 I 0.776
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.787
ASIS012063 Anopheles sinensis ASIS012063 I 0.776
ASIS022059 Anopheles sinensis ASIS022059 I 0.787
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.776
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.785
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.814
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I 0.784
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I 0.795
BGLB009896 Biomphalaria glabrata BGLB009896 I 0.764
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.778
SCRT1 Bos taurus ENSBTAG00000046208 I 0.782
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.815
Bm4071 Brugia malayi Bm4071 N 0.761
SCRT2 Callithrix jacchus ENSCJAG00000020870 I 0.771
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.782
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.790
CapteG149623 Capitella teleta CapteG149623 I 0.792
CapteG176021 Capitella teleta CapteG176021 I 0.784
CapteG223614 Capitella teleta CapteG223614 I 0.799
CapteG76620 Capitella teleta CapteG76620 I 0.784
SCRT2 Cavia porcellus ENSCPOG00000008447 I 0.771
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.782
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.798
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.782
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I 0.771
CLEC001353 Cimex lectularius CLEC001353 I 0.787
csin111588 Clonorchis sinensis csin111588 I 0.785
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.776
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.787
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.776
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.787
KGM_21493 Danaus plexippus KGM_21493 I 0.778
scrt1b Danio rerio ENSDARG00000040214 I 0.817
scrt2 Danio rerio ENSDARG00000056175 I 0.793
scrt1a Danio rerio ENSDARG00000100821 I 0.817
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I 0.775
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I 0.771
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.782
DME_0000421901 Dracunculus medinensis DME_0000421901 I 0.771
GF24781 Drosophila ananassae FBgn0101774 I 0.780
GF25020 Drosophila ananassae FBgn0102012 I 0.789
GG14232 Drosophila erecta FBgn0106493 I 0.780
GG15174 Drosophila erecta FBgn0107427 I 0.789
GH15771 Drosophila grimshawi FBgn0123242 I 0.789
scrt Drosophila melanogaster FBgn0004880 D 0.789
CG12605 Drosophila melanogaster FBgn0035481 D 0.780
GI12551 Drosophila mojavensis FBgn0135308 I 0.789
GI12763 Drosophila mojavensis FBgn0135520 I 0.778
GA11715 Drosophila pseudoobscura FBgn0071765 I 0.780
GM11368 Drosophila sechellia FBgn0166311 I 0.789
GM14024 Drosophila sechellia FBgn0168953 I 0.780
GM14603 Drosophila sechellia FBgn0169524 I 0.789
GD13304 Drosophila simulans FBgn0185023 I 0.780
GD13305 Drosophila simulans FBgn0185024 I 0.780
GD13794 Drosophila simulans FBgn0185494 I 0.789
GJ16103 Drosophila virilis FBgn0203288 I 0.789
GJ16104 Drosophila virilis FBgn0203289 I 0.778
GK16692 Drosophila willistoni FBgn0218694 I 0.780
GK17507 Drosophila willistoni FBgn0219506 I 0.789
GE20660 Drosophila yakuba FBgn0237965 I 0.780
GE21392 Drosophila yakuba FBgn0238652 I 0.789
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.787
EEL_0000648301 Elaeophora elaphi EEL_0000648301 N 0.761
EVEC_0000710001 Enterobius vermicularis EVEC_0000710001 I 0.787
D915_06717 Fasciola hepatica D915_06717 I 0.787
SCRT2 Felis catus ENSFCAG00000010922 I 0.771
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.800
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.814
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I 0.786
SCRT2 Gallus gallus ENSGALG00000028912 I 0.798
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.812
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.812
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.784
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.782
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I 0.771
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.787
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.778
HMEL014701 Heliconius melpomene HMEL014701 I 0.778
SCRT2 Homo sapiens ENSG00000215397 D 0.771
SCRT1 Homo sapiens ENSG00000261678 D 0.782
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.782
ISCW021315 Ixodes scapularis ISCW021315 I 0.799
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.817
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I 0.789
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.817
LOAG_08891 Loa loa LOAG_08891 I 0.770
LotgiG58520 Lottia gigantea LotgiG58520 I 0.776
SCRT2 Loxodonta africana ENSLAFG00000030340 I 0.771
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.782
LCUP005777 Lucilia cuprina LCUP005777 I 0.768
LCUP005780 Lucilia cuprina LCUP005780 I 0.789
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.787
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I 0.771
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.781
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.786
MESCA005876 Megaselia scalaris MESCA005876 I 0.766
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.798
MCINX009925 Melitaea cinxia MCINX009925 I 0.778
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.786
MDOA001622 Musca domestica MDOA001622 I 0.766
MDOA005810 Musca domestica MDOA005810 I 0.789
Scrt1 Mus musculus ENSMUSG00000048385 I 0.782
Scrt2 Mus musculus ENSMUSG00000060257 I 0.771
NEMVEDRAFT_v1g108258 Nematostella vectensis NEMVEDRAFT_v1g108258 I 0.775
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I 0.771
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.815
nOo.2.0.1.g10180 Onchocerca ochengi nOo.2.0.1.g10180 N 0.761
WBGene00237257 Onchocerca volvulus WBGene00237257 N 0.761
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.791
T265_09545 Opisthorchis viverrini T265_09545 I 0.785
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I 0.772
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.812
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I 0.793
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.812
scrt1b Oryzias latipes ENSORLG00000008641 I 0.814
scrt2 Oryzias latipes ENSORLG00000015072 I 0.795
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.782
SCRT2 Otolemur garnettii ENSOGAG00000031187 I 0.771
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.782
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.782
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.797
PHUM474180 Pediculus humanus PHUM474180 I 0.787
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.778
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.812
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I 0.795
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.814
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.789
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.781
Scrt2 Rattus norvegicus ENSRNOG00000005148 I 0.771
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.782
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.785
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I 0.785
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.786
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.779
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.785
A_07725 Schistosoma haematobium A_07725 I 0.785
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.785
Smp_054430 Schistosoma mansoni Smp_054430 I 0.785
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.785
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.785
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.787
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.785
L889_g21793 Steinernema feltiae L889_g21793 I 0.781
L893_g27175 Steinernema glaseri L893_g27175 I 0.778
L898_g5709 Steinernema monticolum L898_g5709 I 0.781
L892_g9690 Steinernema scapterisci L892_g9690 I 0.785
SMAR010760 Strigamia maritima SMAR010760 I 0.812
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.801
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.795
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.797
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.795
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.782
SMUV_0000843501 Syphacia muris SMUV_0000843501 I 0.787
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.798
scrt2 Takifugu rubripes ENSTRUG00000007620 I 0.795
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.814
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.812
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.801
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I 0.795
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.814
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.783
D917_06340 Trichinella nativa D917_06340 I 0.795
EFV52761 Trichinella spiralis EFV52761 I 0.795
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.785
TriadG20314 Trichoplax adhaerens TriadG20314 I 0.765
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I 0.800
D918_03987 Trichuris suis D918_03987 I 0.800
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I 0.800
SCRT2 Tursiops truncatus ENSTTRG00000007039 I 0.771
WUBG_08818 Wuchereria bancrofti WUBG_08818 N 0.761
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.801
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I 0.795
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.814
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.812
L798_11766 Zootermopsis nevadensis L798_11766 I 0.787