CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DOTSEDRAFT_40082
(
Dothistroma septosporum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
DOTSEDRAFT_40082
T085551_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU09333
M01892_2.00
Neurospora crassa
NNNNGCCTDN
NHAGGCNNNN
PBM
Weirauch et al.(2014)
pTH8940
0.757
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EME48795
C2H2 ZF
407
429
HTCEICTKEFKRPCDLTKHIKTH
Links
Other
C2H2 ZF
family TFs
Other
Dothistroma septosporum
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.C_scaffold_5000603
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5000603
N
0.000
HAT
Arabidopsis thaliana
AT3G42170
N
0.000
Bostr.0556s0643
Boechera stricta
Bostr.0556s0643
N
0.000
Bostr.20129s0513
Boechera stricta
Bostr.20129s0513
N
0.000
BRADI1G09660
Brachypodium distachyon
BRADI1G09660
N
0.000
BRADI3G40810
Brachypodium distachyon
BRADI3G40810
N
0.000
Bo4g107870
Brassica oleracea
Bo4g107870
N
0.000
Bo4g137780
Brassica oleracea
Bo4g137780
N
0.000
PK27100.1
Cannabis sativa
PK27100.1
N
0.000
Cagra.13611s0003
Capsella grandiflora
Cagra.13611s0003
N
0.000
Cagra.1725s0137
Capsella grandiflora
Cagra.1725s0137
N
0.000
Carubv10008021m.g
Capsella rubella
Carubv10008021m.g
N
0.000
Carubv10019720m.g
Capsella rubella
Carubv10019720m.g
N
0.000
Ciclev10007308m.g
Citrus clementina
Ciclev10007308m.g
N
0.000
Ciclev10025036m.g
Citrus clementina
Ciclev10025036m.g
N
0.000
orange1.1g005485m.g
Citrus sinensis
orange1.1g005485m.g
N
0.000
orange1.1g002915m.g
Citrus sinensis
orange1.1g002915m.g
N
0.000
Cucsa.036140
Cucumis sativus
Cucsa.036140
N
0.000
Eucgr.F03885
Eucalyptus grandis
Eucgr.F03885
N
0.000
Eucgr.C01383
Eucalyptus grandis
Eucgr.C01383
N
0.000
Thhalv10002435m.g
Eutrema salsugineum
Thhalv10002435m.g
N
0.000
gene15718-v1.0-hybrid
Fragaria vesca
gene15718-v1.0-hybrid
N
0.000
gene30791-v1.0-hybrid
Fragaria vesca
gene30791-v1.0-hybrid
N
0.000
gene31107-v1.0-hybrid
Fragaria vesca
gene31107-v1.0-hybrid
N
0.000
GLYMA13G22855
Glycine max
GLYMA13G22855
N
0.000
GLYMA13G22881
Glycine max
GLYMA13G22881
N
0.000
GLYMA16G32921
Glycine max
GLYMA16G32921
N
0.000
GLYMA17G11981
Glycine max
GLYMA17G11981
N
0.000
Gorai.004G107300
Gossypium raimondii
Gorai.004G107300
N
0.000
Gorai.010G137500
Gossypium raimondii
Gorai.010G137500
N
0.000
Gorai.010G061600
Gossypium raimondii
Gorai.010G061600
N
0.000
Gorai.010G061500
Gossypium raimondii
Gorai.010G061500
N
0.000
MLOC_75540
Hordeum vulgare
MLOC_75540
N
0.000
MLOC_66012
Hordeum vulgare
MLOC_66012
N
0.000
Lus10032337.g
Linum usitatissimum
Lus10032337.g
N
0.000
MDP0000197332
Malus domestica
MDP0000197332
N
0.000
MDP0000394762
Malus domestica
MDP0000394762
N
0.000
cassava11655.m1
Manihot esculenta
cassava11655.m1
N
0.000
mgf025287m
Mimulus guttatus
mgf025287m
N
0.000
GSMUA_Achr8G29120_001
Musa acuminata
GSMUA_Achr8G29120_001
N
0.000
GSMUA_Achr3G16690_001
Musa acuminata
GSMUA_Achr3G16690_001
N
0.000
GSMUA_Achr3G02770_001
Musa acuminata
GSMUA_Achr3G02770_001
N
0.000
OB08G27850
Oryza brachyantha
OB08G27850
N
0.000
OB08G27840
Oryza brachyantha
OB08G27840
N
0.000
OB03G40190
Oryza brachyantha
OB03G40190
N
0.000
ORGLA05G0237000
Oryza glaberrima
ORGLA05G0237000
N
0.000
ORGLA05G0236800
Oryza glaberrima
ORGLA05G0236800
N
0.000
ORGLA05G0072400
Oryza glaberrima
ORGLA05G0072400
N
0.000
ORGLA03G0300400
Oryza glaberrima
ORGLA03G0300400
N
0.000
BGIOSGA009862
Oryza indica
BGIOSGA009862
N
0.000
BGIOSGA018468
Oryza indica
BGIOSGA018468
N
0.000
BGIOSGA020445
Oryza indica
BGIOSGA020445
N
0.000
OS03G0733400
Oryza sativa
OS03G0733400
N
0.000
OS05G0583200
Oryza sativa
OS05G0583200
N
0.000
Pavir.J31170
Panicum virgatum
Pavir.J31170
N
0.000
Pavir.J05554
Panicum virgatum
Pavir.J05554
N
0.000
Pavir.Ia00683
Panicum virgatum
Pavir.Ia00683
N
0.000
Pavir.Eb00997
Panicum virgatum
Pavir.Eb00997
N
0.000
Pavir.Eb00995
Panicum virgatum
Pavir.Eb00995
N
0.000
Pavir.Ea02468
Panicum virgatum
Pavir.Ea02468
N
0.000
POPTR_0004s12810
Populus trichocarpa
POPTR_0004s12810
N
0.000
POPTR_0001s20900
Populus trichocarpa
POPTR_0001s20900
N
0.000
POPTR_0003s02610
Populus trichocarpa
POPTR_0003s02610
N
0.000
POPTR_0004s12760
Populus trichocarpa
POPTR_0004s12760
N
0.000
POPTR_0018s12680
Populus trichocarpa
POPTR_0018s12680
N
0.000
POPTR_0018s12690
Populus trichocarpa
POPTR_0018s12690
N
0.000
Pm013703
Prunus mume
Pm013703
N
0.000
PRUPE_ppa002495mg
Prunus persica
PRUPE_ppa002495mg
N
0.000
PRUPE_ppa001983mg
Prunus persica
PRUPE_ppa001983mg
N
0.000
SapurV1A.0344s0280
Salix purpurea
SapurV1A.0344s0280
N
0.000
SapurV1A.0199s0250
Salix purpurea
SapurV1A.0199s0250
N
0.000
SapurV1A.0197s0170
Salix purpurea
SapurV1A.0197s0170
N
0.000
SapurV1A.0034s0250
Salix purpurea
SapurV1A.0034s0250
N
0.000
Si000431m.g
Setaria italica
Si000431m.g
N
0.000
Si034159m.g
Setaria italica
Si034159m.g
N
0.000
Solyc03g116840.1
Solanum lycopersicum
Solyc03g116840.1
N
0.000
Solyc10g080090.1
Solanum lycopersicum
Solyc10g080090.1
N
0.000
PGSC0003DMG400023690
Solanum tuberosum
PGSC0003DMG400023690
N
0.000
PGSC0003DMG400019816
Solanum tuberosum
PGSC0003DMG400019816
N
0.000
PGSC0003DMG400002911
Solanum tuberosum
PGSC0003DMG400002911
N
0.000
Sb02g043380
Sorghum bicolor
Sb02g043380
N
0.000
Sb01g009090
Sorghum bicolor
Sb01g009090
N
0.000
TCM_038144
Theobroma cacao
TCM_038144
N
0.000
TCM_027266
Theobroma cacao
TCM_027266
N
0.000
Traes_4BS_D5227ED8B
Triticum aestivum
Traes_4BS_D5227ED8B
N
0.000
Traes_4BS_5B1737D7C
Triticum aestivum
Traes_4BS_5B1737D7C
N
0.000
Traes_4AL_A494372EB
Triticum aestivum
Traes_4AL_A494372EB
N
0.000
Traes_4AL_54F25AA7C
Triticum aestivum
Traes_4AL_54F25AA7C
N
0.000
Traes_4DS_990D31BB1
Triticum aestivum
Traes_4DS_990D31BB1
N
0.000
Traes_4DS_9C5CECE46
Triticum aestivum
Traes_4DS_9C5CECE46
N
0.000
VIT_11s0016g05750
Vitis vinifera
VIT_11s0016g05750
N
0.000
VIT_09s0002g07340
Vitis vinifera
VIT_09s0002g07340
N
0.000