ENSPPYG00000012624 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000012624 T107110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.827 1.000
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.827 1.000
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.827 1.000
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.827 1.000
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.811 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000014096 C2H2 ZF 174 196
ENSPPYP00000014096 C2H2 ZF 202 224
ENSPPYP00000014096 C2H2 ZF 230 252

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I 0.000
BHLH104 Arabidopsis thaliana AT4G14410 D 0.000
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.000
Bra041033 Brassica rapa Bra041033 I 0.000
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.000
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.000
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I 0.000
Ca_23174 Cicer arietinum Ca_23174 I 0.000
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I 0.000
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I 0.000
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N 0.000
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.000
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I 0.000
GLYMA10G01010 Glycine max GLYMA10G01010 I 0.000
GLYMA20G22010 Glycine max GLYMA20G22010 I 0.000
Lus10021199.g Linum usitatissimum Lus10021199.g N 0.000
Lus10021876.g Linum usitatissimum Lus10021876.g N 0.000
Lus10041148.g Linum usitatissimum Lus10041148.g N 0.000
MTR_1g043430 Medicago truncatula MTR_1g043430 I 0.000
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N 0.000
POPTR_0008s16560 Populus trichocarpa POPTR_0008s16560 N 0.000
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I 0.000
29603.m000513 Ricinus communis 29603.m000513 N 0.000
SapurV1A.0007s0940 Salix purpurea SapurV1A.0007s0940 N 0.000
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N 0.000