ZBTB18 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000011441 T108680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000010784 C2H2 ZF 379 401
ENSPVAP00000010784 C2H2 ZF 420 441
ENSPVAP00000010784 C2H2 ZF 447 469
ENSPVAP00000010784 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11193 Aegilops tauschii F775_11193 N
F775_14972 Aegilops tauschii F775_14972 N
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N
Bo5g081360 Brassica oleracea Bo5g081360 N
PK05257.1 Cannabis sativa PK05257.1 N
PK07396.1 Cannabis sativa PK07396.1 N
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N
Ca_07051 Cicer arietinum Ca_07051 N
Ca_16482 Cicer arietinum Ca_16482 N
Cla000184 Citrullus lanatus Cla000184 N
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N
Cucsa.199850 Cucumis sativus Cucsa.199850 N
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N
GLYMA11G19060 Glycine max GLYMA11G19060 N
GLYMA12G09400 Glycine max GLYMA12G09400 N
GLYMA12G30930 Glycine max GLYMA12G30930 N
GLYMA13G39370 Glycine max GLYMA13G39370 N
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N
MLOC_2787 Hordeum vulgare MLOC_2787 N
MLOC_54308 Hordeum vulgare MLOC_54308 N
MLOC_70503 Hordeum vulgare MLOC_70503 N
LPERR01G32600 Leersia perrieri LPERR01G32600 N
LPERR08G16620 Leersia perrieri LPERR08G16620 N
LPERR09G03450 Leersia perrieri LPERR09G03450 N
LPERR09G10700 Leersia perrieri LPERR09G10700 N
Lus10004887.g Linum usitatissimum Lus10004887.g N
Lus10020597.g Linum usitatissimum Lus10020597.g N
Lus10029525.g Linum usitatissimum Lus10029525.g N
Lus10039613.g Linum usitatissimum Lus10039613.g N
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N
MDP0000131949 Malus domestica MDP0000131949 N
MDP0000300013 Malus domestica MDP0000300013 N
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N
cassava16214.m1 Manihot esculenta cassava16214.m1 N
mgf022319m Mimulus guttatus mgf022319m N
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N
OBART01G37960 Oryza barthii OBART01G37960 N
OBART02G07320 Oryza barthii OBART02G07320 N
OBART08G19670 Oryza barthii OBART08G19670 N
OB0245G10010 Oryza brachyantha OB0245G10010 N
OB05G26090 Oryza brachyantha OB05G26090 N
OB08G26650 Oryza brachyantha OB08G26650 N
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N
OGLUM02G07340 Oryza glumaepatula OGLUM02G07340 N
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N
BGIOSGA000452 Oryza indica BGIOSGA000452 N
BGIOSGA006953 Oryza indica BGIOSGA006953 N
BGIOSGA019943 Oryza indica BGIOSGA019943 N
BGIOSGA030484 Oryza indica BGIOSGA030484 N
BGIOSGA031001 Oryza indica BGIOSGA031001 N
OMERI01G34920 Oryza meridionalis OMERI01G34920 N
OMERI05G15970 Oryza meridionalis OMERI05G15970 N
OMERI08G16450 Oryza meridionalis OMERI08G16450 N
OMERI09G03940 Oryza meridionalis OMERI09G03940 N
OMERI09G11270 Oryza meridionalis OMERI09G11270 N
ONIVA02G08940 Oryza nivara ONIVA02G08940 N
ONIVA04G25710 Oryza nivara ONIVA04G25710 N
ONIVA05G19190 Oryza nivara ONIVA05G19190 N
ONIVA08G08420 Oryza nivara ONIVA08G08420 N
ONIVA08G21960 Oryza nivara ONIVA08G21960 N
ONIVA09G15100 Oryza nivara ONIVA09G15100 N
OPUNC01G36780 Oryza punctata OPUNC01G36780 N
OPUNC02G06490 Oryza punctata OPUNC02G06490 N
OPUNC05G16080 Oryza punctata OPUNC05G16080 N
OPUNC08G17810 Oryza punctata OPUNC08G17810 N
OPUNC09G04260 Oryza punctata OPUNC09G04260 N
OPUNC09G12930 Oryza punctata OPUNC09G12930 N
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N
OS01G0859100 Oryza sativa OS01G0859100 N
OS02G0196100 Oryza sativa OS02G0196100 N
OS08G0504000 Oryza sativa OS08G0504000 N
OS09G0307400 Oryza sativa OS09G0307400 N
OS09G0485600 Oryza sativa OS09G0485600 N
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N
Pavir.J11927 Panicum virgatum Pavir.J11927 N
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N
Pm001374 Prunus mume Pm001374 N
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N
30055.m001542 Ricinus communis 30055.m001542 N
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N
Si013819m.g Setaria italica Si013819m.g N
Si022296m.g Setaria italica Si022296m.g N
Si029897m.g Setaria italica Si029897m.g N
Si030360m.g Setaria italica Si030360m.g N
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N
Solyc06g074360.2 Solanum lycopersicum Solyc06g074360.2 N
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N
Sb02g020840 Sorghum bicolor Sb02g020840 N
Sb02g028220 Sorghum bicolor Sb02g028220 N
Sb07g028010 Sorghum bicolor Sb07g028010 N
Sb09g021850 Sorghum bicolor Sb09g021850 N
TCM_041441 Theobroma cacao TCM_041441 N
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N
Traes_5AL_78701B16C Triticum aestivum Traes_5AL_78701B16C N
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N
Traes_7AS_9671D35EF Triticum aestivum Traes_7AS_9671D35EF N
TRIUR3_30490 Triticum urartu TRIUR3_30490 N
TRIUR3_30537 Triticum urartu TRIUR3_30537 N
TRIUR3_33088 Triticum urartu TRIUR3_33088 N
WIP3 Vitis vinifera VIT_06s0080g00270 N
GRMZM2G000836 Zea mays GRMZM2G000836 N
GRMZM2G071101 Zea mays GRMZM2G071101 N
GRMZM2G084014 Zea mays GRMZM2G084014 N
GRMZM2G150011 Zea mays GRMZM2G150011 N
GRMZM2G445684 Zea mays GRMZM2G445684 N