CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GD18414 *(Drosophila simulans)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	FBgn0189939	T116308_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
lmd M00564_2.00	Drosophila melanogaster	NNCCCCCCVS	SBGGGGGGNN	PBM Busser et al.(2012b) Lmd	0.827	1.000
lmd M03702_2.00	Drosophila melanogaster	BVCCCCCCRCNDHSH	DSDHNGYGGGGGGBV	SELEX Nitta et al.(2015) lmd_1	0.827	1.000
lmd M06157_2.00	Drosophila melanogaster	MVKVCCCCCYRCNG	CNGYRGGGGGBMBK	B1H Zhu et al.(2011) lmd_SANGER_5_FBgn0039039	0.827	1.000
lmd M06158_2.00	Drosophila melanogaster	NNNMCCCCCYRSNRN	NYNSYRGGGGGKNNN	B1H Zhu et al.(2011) lmd_SOLEXA_5_FBgn0039039	0.827	1.000
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
FBpp0216816	C2H2 ZF	408	433	LICRWTGCDEEFPHQQAFVEHIEKCH
FBpp0216816	C2H2 ZF	442	469	FSCFWLDCPRRYKPFNARYKLLIHMRVH
FBpp0216816	C2H2 ZF	476	499	KCPFPGCNKAFSRLENLKIHQRSH
FBpp0216816	C2H2 ZF	505	529	YGCQYKGCLKAFSNSSDRAKHQRTH
FBpp0216816	C2H2 ZF	535	559	YACQLPGCTKRYTDPSSLRKHVKNH

Links
Other C2H2 ZF family TFs
Other *Drosophila simulans* TFs