ORGLA03G0371300 (Oryza glaberrima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORGLA03G0371300 T125090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0371300.1 C2H2 ZF 257 279
ORGLA03G0371300.1 C2H2 ZF 278 305

Links

Other C2H2 ZF family TFs
Other Oryza glaberrima TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N
SCL23 Arabidopsis thaliana AT5G41920 N
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N
PK21090.1 Cannabis sativa PK21090.1 N
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N
Carubv10004949m.g Capsella rubella Carubv10004949m.g N
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N
Ca_11130 Cicer arietinum Ca_11130 N
Cla005525 Citrullus lanatus Cla005525 N
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N
Cucsa.180010 Cucumis sativus Cucsa.180010 N
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N
GLYMA12G02530 Glycine max GLYMA12G02530 N
GLYMA11G10220 Glycine max GLYMA11G10220 N
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N
MLOC_62589 Hordeum vulgare MLOC_62589 N
LPERR11G01220 Leersia perrieri LPERR11G01220 N
LPERR07G16410 Leersia perrieri LPERR07G16410 N
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N
MDP0000289554 Malus domestica MDP0000289554 N
MDP0000269044 Malus domestica MDP0000269044 N
MDP0000287321 Malus domestica MDP0000287321 N
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N
MTR_4g076020 Medicago truncatula MTR_4g076020 N
OBART07G19080 Oryza barthii OBART07G19080 N
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N
BGIOSGA025964 Oryza indica BGIOSGA025964 N
OMERI07G15800 Oryza meridionalis OMERI07G15800 N
ONIVA07G17430 Oryza nivara ONIVA07G17430 N
OPUNC07G17970 Oryza punctata OPUNC07G17970 N
OPUNC07G18000 Oryza punctata OPUNC07G18000 N
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N
OS07G0567700 Oryza sativa OS07G0567700 N
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N
Pm014866 Prunus mume Pm014866 N
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N
29872.m000537 Ricinus communis 29872.m000537 N
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N
Si032551m.g Setaria italica Si032551m.g N
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N
TCM_002021 Theobroma cacao TCM_002021 N
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N
GRMZM2G106548 Zea mays GRMZM2G106548 N