GA25243 (Drosophila pseudoobscura)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 FBgn0246624 T166159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		1.000 1.000
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		1.000 1.000
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.794 0.794
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.794 0.794
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.794 0.794
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.794 0.794
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.794 0.794
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.794 0.794
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.794 0.794
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.794 0.794
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.794 0.794
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.794 0.794
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0279011 CSL 119 249

Links

Other CSL family TFs
Other Drosophila pseudoobscura TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.777
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I 0.740
AAEL006419 Aedes aegypti AAEL006419 I 0.878
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.794
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.794
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.794
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.794
AALB007981 Anopheles albimanus AALB007981 I 0.855
AARA009493 Anopheles arabiensis AARA009493 I 0.802
AATE009298 Anopheles atroparvus AATE009298 I 0.855
ACOM040639 Anopheles coluzzii ACOM040639 I 0.855
ACUA014515 Anopheles culicifacies ACUA014515 I 0.855
ADAC001896 Anopheles darlingi ADAC001896 I 0.781
ADIR011431 Anopheles dirus ADIR011431 I 0.855
AEPI005106 Anopheles epiroticus AEPI005106 I 0.814
AFAF012186 Anopheles farauti AFAF012186 I 0.855
AFUN007280 Anopheles funestus AFUN007280 I 0.855
AGAP008935 Anopheles gambiae AGAP008935 I 0.855
AMAM009373 Anopheles maculatus AMAM009373 I 0.794
AMEC017285 Anopheles melas AMEC017285 I 0.802
AMEM004324 Anopheles merus AMEM004324 I 0.855
AMIN005880 Anopheles minimus AMIN005880 I 0.855
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.847
ASIS021327 Anopheles sinensis ASIS021327 I 0.840
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.847
GB45655 Apis mellifera GB45655 I 0.885
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.794
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.763
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.767
ACEP17167 Atta cephalotes ACEP17167 I 0.885
BGLB010819 Biomphalaria glabrata BGLB010819 I 0.941
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.878
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.794
RBPJ Bos taurus ENSBTAG00000003602 I 0.794
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.763
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.771
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.714
BTMF_0000608501 Brugia timori BTMF_0000608501 I 0.733
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.794
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.794
Aan_R011115 Calypte anna Aan_R011115 I 0.794
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.885
RBPJ Canis familiaris ENSCAFG00000016387 I 0.794
CapteG179039 Capitella teleta CapteG179039 I 0.779
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.795
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.794
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.794
CLEC005205 Cimex lectularius CLEC005205 I 0.854
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.802
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.852
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.852
KGM_08407 Danaus plexippus KGM_08407 I 0.877
rbpja Danio rerio ENSDARG00000003398 I 0.756
rbpjb Danio rerio ENSDARG00000052091 I 0.779
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.784
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.794
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.869
DILT_0001372901 Diphyllobothrium latum DILT_0001372901 I 0.714
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.794
GF14905 Drosophila ananassae FBgn0091930 I 1.000
GG25142 Drosophila erecta FBgn0117267 I 1.000
GH10915 Drosophila grimshawi FBgn0118396 I 1.000
Su(H) Drosophila melanogaster FBgn0004837 D 1.000
GI13259 Drosophila mojavensis FBgn0136016 I 0.985
GL26026 Drosophila persimilis FBgn0163608 I 1.000
GA25242 Drosophila pseudoobscura FBgn0246623 I 1.000
GM15894 Drosophila sechellia FBgn0170810 I 1.000
Su(H) Drosophila simulans FBgn0027417 I 1.000
GJ11880 Drosophila virilis FBgn0199134 I 1.000
GE20814 Drosophila yakuba FBgn0238107 I 1.000
ECPE_0001338601 Echinostoma caproni ECPE_0001338601 I 0.714
RBPJ Equus caballus ENSECAG00000019257 I 0.794
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.794
D915_08967 Fasciola hepatica D915_08967 I 0.833
D915_08968 Fasciola hepatica D915_08968 I 0.727
RBPJ Felis catus ENSFCAG00000030363 I 0.777
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.794
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.775
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.759
RBPJ Gallus gallus ENSGALG00000014365 I 0.794
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.760
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.794
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.794
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.846
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.869
HMEL017244 Heliconius melpomene HMEL017244 I 0.877
HelroG186992 Helobdella robusta HelroG186992 I 0.752
RBPJ Homo sapiens ENSG00000168214 D 0.875
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.794
ISCW010197 Ixodes scapularis ISCW010197 I 0.824
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.794
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.794
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.870
LotgiG159505 Lottia gigantea LotgiG159505 I 0.771
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.794
LCUP003485 Lucilia cuprina LCUP003485 I 0.985
LLOJ000758 Lutzomyia longipalpis LLOJ000758 I 0.811
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.847
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.794
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.794
MESCA005881 Megaselia scalaris MESCA005881 I 0.871
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.769
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.824
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.794
MDOA002342 Musca domestica MDOA002342 I 0.985
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.794
Rbpj Mus musculus ENSMUSG00000039191 D 0.794
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.794
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.794
NV17858 Nasonia vitripennis NV17858 I 0.846
NV17967 Nasonia vitripennis NV17967 I 0.765
NECAME_17145 Necator americanus NECAME_17145 I 0.762
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.794
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.794
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.780
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.760
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.779
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.794
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.794
rbpja Oryzias latipes ENSORLG00000004882 I 0.736
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.745
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.794
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.794
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.794
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.794
PHUM462870 Pediculus humanus PHUM462870 I 0.862
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.794
PPAI000792 Phlebotomus papatasi PPAI000792 I 0.839
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.786
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.736
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.794
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.794
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.720
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.762
PPA16711 Pristionchus pacificus PPA16711 I 0.714
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.794
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.746
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.794
RPRC014254 Rhodnius prolixus RPRC014254 I 0.786
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.817
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.794
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.833
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.833
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.833
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.833
SINV15808 Solenopsis invicta SINV15808 I 0.885
RBPJ Sorex araneus ENSSARG00000001169 I 0.794
SPER_0003199901 Spirometra erinaceieuropaei SPER_0003199901 I 0.714
SMAR001432 Strigamia maritima SMAR001432 I 0.893
RBPJ Sus scrofa ENSSSCG00000022155 I 0.794
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.794
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.794
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.794
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.775
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.775
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.756
tetur11g06371 Tetranychus urticae tetur11g06371 I 0.725
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.786
TC014468 Tribolium castaneum TC014468 I 0.870
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.833
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.794
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.794
Tal_R001466 Tyto alba Tal_R001466 I 0.794
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.889
AAB05479 Xenopus laevis AAB05479 I 0.786
rbpj.S Xenopus laevis XB-GENE-865998 I 0.786
rbpj Xenopus tropicalis XB-GENE-490756 I 0.794
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.786
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.752
L798_15068 Zootermopsis nevadensis L798_15068 I 0.892