CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000011590
(
Gadus morhua
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSGMOG00000011590
T168024_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
1.000
1.000
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.957
0.957
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.894
0.894
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.894
0.894
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000012401
CxxC
14
60
GARRRRTRCRRCQACMRTECGECHFCKDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Gadus morhua
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB2A
Arabidopsis lyrata
fgenesh2_kg.6__469__AT5G05410.1
I
DREB2B
Arabidopsis lyrata
fgenesh2_kg.3__1148__AT3G11020.1
I
DREB2A
Arabidopsis thaliana
AT5G05410
D
Bostr.13129s0423
Boechera stricta
Bostr.13129s0423
I
Bostr.19424s1037
Boechera stricta
Bostr.19424s1037
I
Bo1g141310
Brassica oleracea
Bo1g141310
I
Bo2g006960
Brassica oleracea
Bo2g006960
I
Bra034159
Brassica rapa
Bra034159
I
Bra028759
Brassica rapa
Bra028759
I
Bra005852
Brassica rapa
Bra005852
I
PK07402.1
Cannabis sativa
PK07402.1
D
Cagra.7053s0020
Capsella grandiflora
Cagra.7053s0020
I
Cagra.1655s0066
Capsella grandiflora
Cagra.1655s0066
I
Cagra.1504s0045
Capsella grandiflora
Cagra.1504s0045
I
Carubv10023556m.g
Capsella rubella
Carubv10023556m.g
I
Carubv10013771m.g
Capsella rubella
Carubv10013771m.g
I
Carubv10001099m.g
Capsella rubella
Carubv10001099m.g
I
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
Thhalv10021161m.g
Eutrema salsugineum
Thhalv10021161m.g
I
GLYMA18G43750
Glycine max
GLYMA18G43750
I
GLYMA07G19221
Glycine max
GLYMA07G19221
I
chr1.LjT01D01.90.nd
Lotus japonicus
chr1.LjT01D01.90.nd
I
cassava46663.m1
Manihot esculenta
cassava46663.m1
I
MTR_7g070220
Medicago truncatula
MTR_7g070220
I
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
29820.m001008
Ricinus communis
29820.m001008
I
Solyc06g050520.1
Solanum lycopersicum
Solyc06g050520.1
I
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
TCM_021596
Theobroma cacao
TCM_021596
I