Bm2663 (Brugia malayi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bm2663 T204785_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pal-1
M02183_2.00 		Caenorhabditis elegans
GYAATWAA
TTWATTRC		 PBM
Weirauch et al.(2014)
pTH6016 		0.816 0.860
CDX4
M05129_2.00 		Homo sapiens
VKTTTATKRCH
DGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX 		0.649 0.649
Cdx4
M09197_2.00 		Mus musculus
WGATTTATDRBH
DVYHATAAATCW		 Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A 		0.649 0.649
CDX4
M05130_2.00 		Homo sapiens
BGTCGTAAAHN
NDTTTACGACV		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1 		0.649 0.649
CDX4
M05131_2.00 		Homo sapiens
VKTTTATKGCN
NGCMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2 		0.649 0.649
Q70LF3_ARTSF
M02211_2.00 		Artemia franciscana
BTAATTAB
VTAATTAV		 PBM
Weirauch et al.(2014)
pTH5553 		0.633 0.649
Cdx1
M00427_2.00 		Mus musculus
NWWATDRNN
NNYHATWWN		 PBM
Berger et al.(2008)
Cdx1_2245 		0.617 0.667
CDX1
M03115_2.00 		Homo sapiens
NTTTATKRB
VYMATAAAN		 SELEX
Jolma et al.(2013)
CDX1_1 		0.617 0.667
CDX1
M05018_2.00 		Homo sapiens
VKTTTATKRCN
NGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX 		0.617 0.667
CDX1
M09140_2.00 		Homo sapiens
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C 		0.617 0.667
Cdx1
M09186_2.00 		Mus musculus
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C 		0.617 0.667
CDX1
M10670_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q4 		0.617 0.667
CDX1
M10671_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q5 		0.617 0.667
CDX1
M05019_2.00 		Homo sapiens
NGTCGTAAAWB
VWTTTACGACN		 SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX 		0.617 0.667
Cdx2
M00447_2.00 		Mus musculus
NWWAYDRNN
NNYHRTWWN		 PBM
Berger et al.(2008)
Cdx2_4272 		0.617 0.649
Cdx2
M09193_2.00 		Mus musculus
BTTTATKRCYBY
RVRGYMATAAAV		 Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A 		0.617 0.649
Cdx2
M09572_2.00 		Mus musculus
NTTTTATKRC
GYMATAAAAN		 Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586 		0.617 0.649
CDX1
M10761_2.00 		Gallus gallus
BDBWAAK
MTTWVHV		 Transfac
Matys et al.(2006)
V$CDXA_01 		0.617 0.649
CDX1
M10762_2.00 		Gallus gallus
WWWWMYR
YRKWAWW		 Transfac
Matys et al.(2006)
V$CDXA_02 		0.617 0.649
CDX2
M03196_2.00 		Homo sapiens
KTTTATKRB
VYMATAAAM		 SELEX
Jolma et al.(2013)
CDX2_1 		0.617 0.632
CDX2
M05248_2.00 		Homo sapiens
NDTWAYRRYN
NRYYRTWAHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1 		0.617 0.632
CDX2
M05249_2.00 		Homo sapiens
NDWWATKRB
VYMATWWHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2 		0.617 0.632
CDX2
M08131_2.00 		Homo sapiens
YTTTATKRCHB
VDGYMATAAAR		 ChIP-seq
Mathelier et al.(2014)
MA0465.1 		0.617 0.632
CDX2
M09152_2.00 		Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH		 Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A 		0.617 0.632
CDX2
M10723_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_01 		0.617 0.632
CDX2
M10724_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_02 		0.617 0.632
CDX2
M10725_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5 		0.617 0.632
CDX2
M10726_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q6 		0.617 0.632
CDX2
M05250_2.00 		Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN		 SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX 		0.617 0.632
cad
M03780_2.00 		Drosophila melanogaster
NKTTTATKRCHB
VDGYMATAAAMN		 SELEX
Nitta et al.(2015)
cad_1 		0.613 0.649
cad
M03781_2.00 		Drosophila melanogaster
NDTTTATKRCHN
NDGYMATAAAHN		 SELEX
Nitta et al.(2015)
cad_2 		0.613 0.649
cad
M03782_2.00 		Drosophila melanogaster
NDTTTATKRCNB
VNGYMATAAAHN		 SELEX
Nitta et al.(2015)
cad_3 		0.613 0.649
cad
M03783_2.00 		Drosophila melanogaster
NNTTTAYGRYNN
NNRYCRTAAANN		 SELEX
Nitta et al.(2015)
cad_4 		0.613 0.649
cad
M06223_2.00 		Drosophila melanogaster
HTTWATTR
YAATWAAD		 B1H
Zhu et al.(2011)
Cad_Cell_FBgn0000251 		0.613 0.649
cad
M06224_2.00 		Drosophila melanogaster
RBYVDAAMV
BKTTHBRVY		 B1H
Zhu et al.(2011)
cad_FlyReg_FBgn0000251 		0.613 0.649
cad
M06225_2.00 		Drosophila melanogaster
NTTWATKR
YMATWAAN		 B1H
Zhu et al.(2011)
Cad_SOLEXA_FBgn0000251 		0.613 0.649
cad
M08420_2.00 		Drosophila melanogaster
DTTTTATKRYY
RRYMATAAAAH		 ChIP-chip
Mathelier et al.(2014)
MA0216.2 		0.613 0.649
cad
M09580_2.00 		Drosophila melanogaster
DTTTAYGRYN
NRYCRTAAAH		 Misc
Heinz et al.(2010)
Drosophila-Embryos_modEncode 		0.613 0.649
cad
M09674_2.00 		Drosophila melanogaster
HTTTATKRBY
RVYMATAAAD		 Misc
Kulakovskiy et al.(2009)
cad 		0.613 0.649
cad
M10783_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$CAD_Q6 		0.613 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bm2663a Homeodomain 214 270

Links

Other Homeodomain family TFs
Other Brugia malayi TFs

299 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07483 Aegilops tauschii F775_07483 I
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I
fgenesh2_kg.1__2057__AT1G18790.1 Arabidopsis lyrata fgenesh2_kg.1__2057__AT1G18790.1 I
fgenesh1_pg.C_scaffold_8002648 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002648 I
scaffold_103100001.1 Arabidopsis lyrata scaffold_103100001.1 I
fgenesh1_pg.C_scaffold_2001738 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001738 I
fgenesh1_pg.C_scaffold_2000886 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000886 I
RKD1 Arabidopsis thaliana AT1G18790 I
RKD2 Arabidopsis thaliana AT1G74480 D
RKD3 Arabidopsis thaliana AT5G66990 N
Bostr.3288s0094 Boechera stricta Bostr.3288s0094 I
Bostr.0568s0123 Boechera stricta Bostr.0568s0123 N
BRADI2G40920 Brachypodium distachyon BRADI2G40920 N
Bo8g068090 Brassica oleracea Bo8g068090 I
Bo7g064180 Brassica oleracea Bo7g064180 I
Bra015907 Brassica rapa Bra015907 I
Bra008153 Brassica rapa Bra008153 I
Bra037130 Brassica rapa Bra037130 N
Bra016542 Brassica rapa Bra016542 I
Bra012122 Brassica rapa Bra012122 I
Cagra.4153s0001 Capsella grandiflora Cagra.4153s0001 I
Cagra.2007s0003 Capsella grandiflora Cagra.2007s0003 N
Cagra.0402s0077 Capsella grandiflora Cagra.0402s0077 I
Carubv10027579m.g Capsella rubella Carubv10027579m.g N
Carubv10021541m.g Capsella rubella Carubv10021541m.g I
Carubv10011133m.g Capsella rubella Carubv10011133m.g I
evm.TU.supercontig_423.7 Carica papaya evm.TU.supercontig_423.7 I
Ca_13151 Cicer arietinum Ca_13151 I
Ca_27191 Cicer arietinum Ca_27191 I
Cla019404 Citrullus lanatus Cla019404 I
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I
Cucsa.197700 Cucumis sativus Cucsa.197700 I
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I
Thhalv10009845m.g Eutrema salsugineum Thhalv10009845m.g N
Thhalv10005560m.g Eutrema salsugineum Thhalv10005560m.g N
gene13862-v1.0-hybrid Fragaria vesca gene13862-v1.0-hybrid N
GLYMA17G10866 Glycine max GLYMA17G10866 I
GLYMA06G20881 Glycine max GLYMA06G20881 I
GLYMA05G01030 Glycine max GLYMA05G01030 I
GLYMA04G33516 Glycine max GLYMA04G33516 I
Gorai.008G193400 Gossypium raimondii Gorai.008G193400 I
Gorai.006G266900 Gossypium raimondii Gorai.006G266900 I
MLOC_12609 Hordeum vulgare MLOC_12609 I
MLOC_59560 Hordeum vulgare MLOC_59560 I
LPERR06G07570 Leersia perrieri LPERR06G07570 I
Lus10035008.g Linum usitatissimum Lus10035008.g I
Lus10034456.g Linum usitatissimum Lus10034456.g I
Lus10019100.g Linum usitatissimum Lus10019100.g I
chr4.CM0087.990.nc Lotus japonicus chr4.CM0087.990.nc I
MDP0000266172 Malus domestica MDP0000266172 I
MDP0000261199 Malus domestica MDP0000261199 I
cassava35166.m1 Manihot esculenta cassava35166.m1 I
MTR_3g435550 Medicago truncatula MTR_3g435550 I
mg020279m Mimulus guttatus mg020279m I
mgf022310m Mimulus guttatus mgf022310m I
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N
OB06G17750 Oryza brachyantha OB06G17750 I
OB02G39310 Oryza brachyantha OB02G39310 I
ORGLA06G0077700 Oryza glaberrima ORGLA06G0077700 I
BGIOSGA022580 Oryza indica BGIOSGA022580 I
OMERI06G09770 Oryza meridionalis OMERI06G09770 I
ONIVA06G09450 Oryza nivara ONIVA06G09450 I
OPUNC06G07940 Oryza punctata OPUNC06G07940 I
ORUFI06G08510 Oryza rufipogon ORUFI06G08510 I
OS06G0228950 Oryza sativa OS06G0228950 I
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I
Pavir.J13146 Panicum virgatum Pavir.J13146 I
Pavir.Da01160 Panicum virgatum Pavir.Da01160 I
PDK_20s1383532g001 Phoenix dactylifera PDK_20s1383532g001 I
Pm024905 Prunus mume Pm024905 I
PRUPE_ppa023107mg Prunus persica PRUPE_ppa023107mg I
30138.m004071 Ricinus communis 30138.m004071 I
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N
Si020172m.g Setaria italica Si020172m.g I
Si008273m.g Setaria italica Si008273m.g I
Solyc03g116010.1 Solanum lycopersicum Solyc03g116010.1 I
Sb10g008120 Sorghum bicolor Sb10g008120 I
TCM_014009 Theobroma cacao TCM_014009 I
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I
Traes_6BL_301505440 Triticum aestivum Traes_6BL_301505440 I
TRIUR3_19503 Triticum urartu TRIUR3_19503 I
VIT_17s0000g06250 Vitis vinifera VIT_17s0000g06250 I
GRMZM2G392306 Zea mays GRMZM2G392306 I