CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSFALG00000010263 *(Ficedula albicollis)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSFALG00000010263	T209569_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
DLX6 M03078_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX6_1	0.867	1.000
DLX6 M04905_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX6_eDBD_HT-SELEX	0.867	1.000
DLX6 M04906_2.00	Homo sapiens	NTAAYKAB	VTMRTTAN	SELEX Yin et al.(2017) DLX6_eDBD_Methyl-HT-SELEX_1	0.867	1.000
DLX6 M04907_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX6_eDBD_Methyl-HT-SELEX_2	0.867	1.000
Dlx1 M00491_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Dlx1_1741	0.867	0.982
DLX1 M03166_2.00	Homo sapiens	NNTAATTDNN	NNHAATTANN	SELEX Jolma et al.(2013) DLX1_1	0.867	0.982
Dlx1 M03281_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Dlx1_1	0.867	0.982
DLX1 M05176_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX1_eDBD_HT-SELEX	0.867	0.982
DLX1 M05178_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX1_FL_HT-SELEX	0.867	0.982
DLX1 M05177_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX1_eDBD_Methyl-HT-SELEX	0.867	0.982
DLX1 M05179_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX1_FL_Methyl-HT-SELEX	0.867	0.982
Dlx2 M00423_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Dlx2_2273	0.850	0.895
DLX2 M03118_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX2_1	0.850	0.895
Dlx2 M03254_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Dlx2_1	0.850	0.895
DLX2 M05026_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_eDBD_HT-SELEX	0.850	0.895
DLX2 M05028_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_FL_HT-SELEX	0.850	0.895
DLX2 M10674_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX2_Q6	0.850	0.895
DLX2 M05027_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_eDBD_Methyl-HT-SELEX	0.850	0.895
DLX2 M05029_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX2_FL_Methyl-HT-SELEX	0.850	0.895
Dlx5 M00449_2.00	Mus musculus	WRATNDN	NHNATYW	PBM Berger et al.(2008) Dlx5_3419	0.845	0.895
DLX5 M03095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX5_1	0.845	0.895
DLX5 M04953_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_eDBD_HT-SELEX	0.845	0.895
DLX5 M04956_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_FL_HT-SELEX	0.845	0.895
Dlx5 M09195_2.00	Mus musculus	WAATTRYWKBB	VVMWRYAATTW	Misc Kulakovskiy et al.(2013) DLX5_MOUSE.H11MO.0.C	0.845	0.895
DLX5 M10650_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX5_Q3	0.845	0.895
DLX5 M04954_2.00	Homo sapiens	NTAAYDAB	VTHRTTAN	SELEX Yin et al.(2017) DLX5_eDBD_Methyl-HT-SELEX_1	0.845	0.895
DLX5 M04955_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_eDBD_Methyl-HT-SELEX_2	0.845	0.895
DLX5 M04957_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) DLX5_FL_Methyl-HT-SELEX_1	0.845	0.895
DLX5 M04958_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX5_FL_Methyl-HT-SELEX_2	0.845	0.895
Dlx3 M00387_2.00	Mus musculus	NTAATDRNN	NNYHATTAN	PBM Berger et al.(2008) Dlx3_1030	0.839	0.860
DLX3 M03081_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX3_1	0.839	0.860
DLX3 M04922_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX3_eDBD_HT-SELEX	0.839	0.860
DLX3 M04925_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX3_FL_HT-SELEX	0.839	0.860
DLX3 M09129_2.00	Homo sapiens	RVTAATTRVH	DBYAATTABY	Misc Kulakovskiy et al.(2013) DLX3_HUMAN.H11MO.0.C	0.839	0.860
Dlx3 M09172_2.00	Mus musculus	RVTAATTRVH	DBYAATTABY	Misc Kulakovskiy et al.(2013) DLX3_MOUSE.H11MO.0.C	0.839	0.860
dlx3.L M10803_2.00	Xenopus laevis	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX3_02	0.839	0.860
DLX3 M10638_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX3_Q3	0.839	0.860
DLX3 M10639_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DLX3_Q6	0.839	0.860
dlx3.L M10804_2.00	Xenopus laevis	YAWRTAAAYAWWRY	RYWWTRTTTAYWWR	Transfac Matys et al.(2006) V$XFD1_01	0.839	0.860
DLX3 M04923_2.00	Homo sapiens	NTWAYKHB	VDMRTWAN	SELEX Yin et al.(2017) DLX3_eDBD_Methyl-HT-SELEX_1	0.839	0.860
DLX3 M04924_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX3_eDBD_Methyl-HT-SELEX_2	0.839	0.860
DLX3 M04926_2.00	Homo sapiens	NTWAYGHB	VDCRTWAN	SELEX Yin et al.(2017) DLX3_FL_Methyl-HT-SELEX_1	0.839	0.860
DLX3 M04927_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX3_FL_Methyl-HT-SELEX_2	0.839	0.860
Dll M02112_2.00	Drosophila melanogaster	NVTAATTANN	NNTAATTABN	PBM Weirauch et al.(2014) pTH5506	0.836	0.912
Dll M03777_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Dll_1	0.836	0.912
Dll M03778_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Dll_2	0.836	0.912
Dll M06479_2.00	Drosophila melanogaster	TAATTDB	VHAATTA	B1H Mathelier et al.(2014) MA0187.1	0.836	0.912
Dll M06217_2.00	Drosophila melanogaster	TAATTDB	VHAATTA	B1H Zhu et al.(2011) Dll_Cell_FBgn0000157	0.836	0.912
Dll M06218_2.00	Drosophila melanogaster	TAATKR	YMATTA	B1H Zhu et al.(2011) Dll_SOLEXA_FBgn0000157	0.836	0.912
DLX4 M03112_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) DLX4_1	0.834	0.895
DLX4 M05002_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX4_eDBD_HT-SELEX	0.834	0.895
DLX4 M05005_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX4_FL_HT-SELEX	0.834	0.895
DLX4 M05003_2.00	Homo sapiens	NTAAYRAB	VTYRTTAN	SELEX Yin et al.(2017) DLX4_eDBD_Methyl-HT-SELEX_1	0.834	0.895
DLX4 M05004_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) DLX4_eDBD_Methyl-HT-SELEX_2	0.834	0.895
DLX4 M05006_2.00	Homo sapiens	NTAAYKAB	VTMRTTAN	SELEX Yin et al.(2017) DLX4_FL_Methyl-HT-SELEX_1	0.834	0.895
DLX4 M05007_2.00	Homo sapiens	NTAATTRB	VYAATTAN	SELEX Yin et al.(2017) DLX4_FL_Methyl-HT-SELEX_2	0.834	0.895
Dlx4 M00409_2.00	Mus musculus	NWAATNDN	NHNATTWN	PBM Berger et al.(2008) Dlx4_3488	0.834	0.877
NEMVEDRAFT_v1g8907 M02154_2.00	Nematostella vectensis	NTAATDRNNN	NNNYHATTAN	PBM Weirauch et al.(2014) pTH6483	0.685	0.544
MSX2 M00290_2.00	Homo sapiens	WDATNDNN	NNHNATHW	PBM Barrera et al.(2016) MSX2_REF	0.685	0.596
Msx2 M00414_2.00	Mus musculus	HRATKRNN	NNYMATYD	PBM Berger et al.(2008) Msx2_3449	0.685	0.596
Msx3 M00429_2.00	Mus musculus	TAATKDNN	NNHMATTA	PBM Berger et al.(2008) Msx3_3206	0.685	0.596
Msx1 M00501_2.00	Mus musculus	NHDATND	HNATHDN	PBM Berger et al.(2008) Msx1_3031	0.685	0.596
MSX1 M03184_2.00	Homo sapiens	TAATTRBHHNHTAATTRN	NYAATTADNDDVYAATTA	SELEX Jolma et al.(2013) MSX1_1	0.685	0.596
MSX1 M03185_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_2	0.685	0.596
MSX1 M03186_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_3	0.685	0.596
MSX2 M03127_2.00	Homo sapiens	TAATTRBHWKWTAATTGV	BCAATTAWMWDVYAATTA	SELEX Jolma et al.(2013) MSX2_1	0.685	0.596
MSX2 M03128_2.00	Homo sapiens	NTAATTGB	VCAATTAN	SELEX Jolma et al.(2013) MSX2_2	0.685	0.596
Msx3 M03255_2.00	Mus musculus	TAATTGSHHNNTAATTRN	NYAATTANNDDSCAATTA	SELEX Jolma et al.(2013) Msx3_1	0.685	0.596
Msx3 M03256_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Msx3_2	0.685	0.596
MSX1 M05221_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_HT-SELEX	0.685	0.596
MSX1 M05224_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_HT-SELEX	0.685	0.596
MSX2 M05060_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_HT-SELEX	0.685	0.596
MSX1 M10715_2.00	Homo sapiens	HNBTWWNTG	CANWWAVND	Transfac Matys et al.(2006) V$MSX1_01	0.685	0.596
MSX1 M10716_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5_01	0.685	0.596
MSX1 M10717_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5	0.685	0.596
MSX2 M10677_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q3	0.685	0.596
MSX2 M10678_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q6	0.685	0.596
MSX2 M00288_2.00	Homo sapiens	NTAATNDN	NHNATTAN	PBM Barrera et al.(2016) MSX2_P148H	0.685	0.596
MSX1 M05222_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_1	0.685	0.596
MSX1 M05223_2.00	Homo sapiens	NTWAYGMB	VKCRTWAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_2	0.685	0.596
MSX1 M05225_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_1	0.685	0.596
MSX1 M05226_2.00	Homo sapiens	NTWAYGWB	VWCRTWAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_2	0.685	0.596
MSX2 M05061_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_1	0.685	0.596
MSX2 M05062_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_2	0.685	0.596
Dr M00555_2.00	Drosophila melanogaster	TAATTRNN	NNYAATTA	PBM Busser et al.(2012a) Msh	0.680	0.561
Dr M06482_2.00	Drosophila melanogaster	TAATTGS	SCAATTA	B1H Mathelier et al.(2014) MA0188.1	0.680	0.561
Dr M06229_2.00	Drosophila melanogaster	TAATTGSHB	VDSCAATTA	B1H Zhu et al.(2011) Dr_Cell_FBgn0000492	0.680	0.561
Dr M06230_2.00	Drosophila melanogaster	TAATTR	YAATTA	B1H Zhu et al.(2011) Dr_SOLEXA_FBgn0000492	0.680	0.561
MSX2 M00289_2.00	Homo sapiens	WDATWDNN	NNHWATHW	PBM Barrera et al.(2016) MSX2_R172H	0.677	0.579
ceh-23 M00671_2.00	Caenorhabditis elegans	HTAATTRNNN	NNNYAATTAD	PBM Narasimhan et al.(2015) pTH9478	0.676	0.491
bsh M02113_2.00	Drosophila melanogaster	NNTAAYBDNN	NNHVRTTANN	PBM Weirauch et al.(2014) pTH6569	0.668	0.579
bsh M03786_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) bsh_1	0.668	0.579
bsh M03787_2.00	Drosophila melanogaster	TAATTRVWTAATKR	YMATTAWBYAATTA	SELEX Nitta et al.(2015) bsh_2	0.668	0.579
bsh M03788_2.00	Drosophila melanogaster	NTAATBRN	NYVATTAN	SELEX Nitta et al.(2015) bsh_3	0.668	0.579
bsh M06483_2.00	Drosophila melanogaster	YTAATBR	YVATTAR	B1H Mathelier et al.(2014) MA0214.1	0.668	0.579
bsh M06231_2.00	Drosophila melanogaster	HYTAATBRV	BYVATTARD	B1H Zhu et al.(2011) Bsh_Cell_FBgn0000529	0.668	0.579
bsh M06232_2.00	Drosophila melanogaster	NTAATKR	YMATTAN	B1H Zhu et al.(2011) Bsh_SOLEXA_FBgn0000529	0.668	0.579
Barx2 M00457_2.00	Mus musculus	NTAABNDNN	NNHNVTTAN	PBM Berger et al.(2008) Barx2_3447	0.667	0.561
BARX2 M04915_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_HT-SELEX	0.667	0.561
BARX2 M04916_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_Methyl-HT-SELEX	0.667	0.561
Lim1 M03853_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Lim1_1	0.666	0.404
Lim1 M06529_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0194.1	0.666	0.404
Lim1 M06332_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Zhu et al.(2011) Lim1_Cell_FBgn0026411	0.666	0.404
Lim1 M06333_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Lim1_SOLEXA_FBgn0026411	0.666	0.404
Bsx M00516_2.00	Mus musculus	NTAAYBDNN	NNHVRTTAN	PBM Berger et al.(2008) Bsx_3483	0.666	0.561
BSX M03235_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BSX_1	0.666	0.561
BSX M05377_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_1	0.666	0.561
BSX M05378_2.00	Homo sapiens	BTAATBRV	BYVATTAV	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_2	0.666	0.561
BSX M05379_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_1	0.666	0.561
BSX M05380_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_2	0.666	0.561
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.663	0.561
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.663	0.561
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.663	0.544
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.663	0.544
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.663	0.544
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.663	0.544
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.663	0.544
Barx1 M00413_2.00	Mus musculus	NNTAAYBDNN	NNHVRTTANN	PBM Berger et al.(2008) Barx1_2877	0.653	0.526
barx1 M02107_2.00	Tetraodon nigroviridis	NTAAYNNNN	NNNNRTTAN	PBM Weirauch et al.(2014) pTH6449	0.653	0.526
BARX1 M03144_2.00	Homo sapiens	TAATBGNWWWTTAATBR	YVATTAAWWWNCVATTA	SELEX Jolma et al.(2013) BARX1_1	0.653	0.526
BARX1 M03145_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BARX1_2	0.653	0.526
Barx1 M09181_2.00	Mus musculus	NNWAAKKGYTWH	DWARCMMTTWNN	Misc Kulakovskiy et al.(2013) BARX1_MOUSE.H11MO.0.C	0.653	0.526
Lhx1 M00405_2.00	Mus musculus	TRATDRNNN	NNNYHATYA	PBM Berger et al.(2008) Lhx1_2240	0.652	0.368
Lhx5 M00445_2.00	Mus musculus	TAATKRNNN	NNNYMATTA	PBM Berger et al.(2008) Lhx5_2279	0.652	0.368
LHX1 M05410_2.00	Homo sapiens	NTRATBRN	NYVATYAN	SELEX Yin et al.(2017) LHX1_eDBD_HT-SELEX	0.652	0.368
LHX5 M04936_2.00	Homo sapiens	NTAATTRS	SYAATTAN	SELEX Yin et al.(2017) LHX5_FL_HT-SELEX	0.652	0.368
LHX1 M05411_2.00	Homo sapiens	NHRAYGHN	NDCRTYDN	SELEX Yin et al.(2017) LHX1_eDBD_Methyl-HT-SELEX	0.652	0.368
LHX5 M04937_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) LHX5_FL_Methyl-HT-SELEX_1	0.652	0.368
LHX5 M04938_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) LHX5_FL_Methyl-HT-SELEX_2	0.652	0.368
unpg M03836_2.00	Drosophila melanogaster	SSTAATYRVN	NBYRATTASS	SELEX Nitta et al.(2015) unpg_1	0.650	0.491
unpg M06517_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0251.1	0.650	0.491
unpg M06311_2.00	Drosophila melanogaster	NBTAATTR	YAATTAVN	B1H Zhu et al.(2011) Unpg_Cell_FBgn0015561	0.650	0.491
unpg M06312_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Unpg_SOLEXA_FBgn0015561	0.650	0.491
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.648	0.561
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.648	0.561
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.648	0.561
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.648	0.561
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.648	0.561
ceh-51 M00678_2.00	Caenorhabditis elegans	NNDAKDRNN	NNYHMTHNN	PBM Narasimhan et al.(2015) pTH9353	0.643	0.474
en M03793_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) en_1	0.642	0.491
en M06485_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0220.1	0.642	0.491
en M06236_2.00	Drosophila melanogaster	NYTAATTR	YAATTARN	B1H Zhu et al.(2011) En_Cell_FBgn0000577	0.642	0.491
en M06237_2.00	Drosophila melanogaster	DBTAATKR	YMATTAVH	B1H Zhu et al.(2011) en_FlyReg_FBgn0000577	0.642	0.491
en M06238_2.00	Drosophila melanogaster	NNNTAATTRN	NYAATTANNN	B1H Zhu et al.(2011) en_SOLEXA_2_FBgn0000577	0.642	0.491
en M06239_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Zhu et al.(2011) En_SOLEXA_FBgn0000577	0.642	0.491
en M09677_2.00	Drosophila melanogaster	HTAATTRN	NYAATTAD	Misc Kulakovskiy et al.(2009) en	0.642	0.491
en M10785_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EN_Q6	0.642	0.491
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.641	0.509
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.641	0.509
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.641	0.509
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.641	0.509
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.641	0.509
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.641	0.509
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.641	0.509
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	0.641	0.526
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	0.641	0.526
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	0.641	0.526
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	0.641	0.526
En2 M00484_2.00	Mus musculus	NNYHATHN	NDATDRNN	PBM Berger et al.(2008) En2_0952	0.640	0.491
EN2 M03189_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) EN2_1	0.640	0.491
EN2 M03190_2.00	Homo sapiens	VBTAATTRNN	NNYAATTAVB	SELEX Jolma et al.(2013) EN2_2	0.640	0.491
En2 M03276_2.00	Mus musculus	VBTAATTASN	NSTAATTAVB	SELEX Jolma et al.(2013) En2_1	0.640	0.491
EN2 M05237_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_HT-SELEX	0.640	0.491
EN2 M05238_2.00	Homo sapiens	VHTDAYGHB	VDCRTHADB	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_1	0.640	0.491
EN2 M05239_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_2	0.640	0.491
En1 M00519_2.00	Mus musculus	HNWTNNN	NNNAWND	PBM Berger et al.(2008) En1_3123	0.640	0.474
EN1 M03180_2.00	Homo sapiens	NNTAATTRVB	VBYAATTANN	SELEX Jolma et al.(2013) EN1_1	0.640	0.474
EN1 M03181_2.00	Homo sapiens	TAATTRSNYAATTA	TAATTRNSYAATTA	SELEX Jolma et al.(2013) EN1_2	0.640	0.474
EN1 M03182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) EN1_3	0.640	0.474
EN1 M03183_2.00	Homo sapiens	TDAKKRSNYMATTA	TAATKRNSYMMTHA	SELEX Jolma et al.(2013) EN1_4	0.640	0.474
EN1 M05218_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_HT-SELEX	0.640	0.474
EN1 M05871_2.00	Homo sapiens	VNYAATTA	TAATTRNB	SMiLE-seq Isakova et al.(2017) EN1	0.640	0.474
EN1 M10714_2.00	Homo sapiens	RTDDTBB	VVAHHAY	Transfac Matys et al.(2006) V$EN1_01	0.640	0.474
EN1 M05219_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_1	0.640	0.474
EN1 M05220_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_2	0.640	0.474
btn M03832_2.00	Drosophila melanogaster	NNTAATKANB	VNTMATTANN	SELEX Nitta et al.(2015) btn_1	0.639	0.474
btn M03833_2.00	Drosophila melanogaster	VNTAATKABN	NVTMATTANB	SELEX Nitta et al.(2015) btn_2	0.639	0.474
btn M06515_2.00	Drosophila melanogaster	DTAATKA	TMATTAH	B1H Mathelier et al.(2014) MA0215.1	0.639	0.474
btn M06307_2.00	Drosophila melanogaster	NDTAATKA	TMATTAHN	B1H Zhu et al.(2011) Btn_Cell_FBgn0014949	0.639	0.474
btn M06308_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) Btn_SOLEXA_FBgn0014949	0.639	0.474
Meox1 M00384_2.00	Mus musculus	NTRATKRNN	NNYMATYAN	PBM Berger et al.(2008) Meox1_2310	0.639	0.439
MEOX1 M03077_2.00	Homo sapiens	NNTAATTASN	NSTAATTANN	SELEX Jolma et al.(2013) MEOX1_1	0.639	0.439
MEOX1 M04901_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_1	0.639	0.439
MEOX1 M04902_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_2	0.639	0.439
MEOX1 M04903_2.00	Homo sapiens	NTAAYGWB	VWCRTTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_1	0.639	0.439
MEOX1 M04904_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_2	0.639	0.439
inv M06491_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Mathelier et al.(2014) MA0229.1	0.639	0.491
inv M06255_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Zhu et al.(2011) Inv_Cell_FBgn0001269	0.639	0.491
inv M06256_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_2_FBgn0001269	0.639	0.491
inv M06257_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_5_FBgn0001269	0.639	0.491
Gbx2 M00462_2.00	Mus musculus	NNDAHNN	NNDTHNN	PBM Berger et al.(2008) Gbx2_3110	0.638	0.474
Gbx1 M00525_2.00	Mus musculus	NNTAATNR	YNATTANN	PBM Berger et al.(2008) Gbx1_2883	0.638	0.474
GBX1 M03193_2.00	Homo sapiens	NBTAATTRSB	VSYAATTAVN	SELEX Jolma et al.(2013) GBX1_1	0.638	0.474
GBX2 M03201_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_1	0.638	0.474
GBX2 M03202_2.00	Homo sapiens	TAATTRVBCAATWA	TWATTGVBYAATTA	SELEX Jolma et al.(2013) GBX2_2	0.638	0.474
GBX2 M03203_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_3	0.638	0.474
Gbx1 M03286_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx1_1	0.638	0.474
Gbx2 M03268_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx2_1	0.638	0.474
GBX2 M05265_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_HT-SELEX	0.638	0.474
GBX2 M05268_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) GBX2_FL_HT-SELEX	0.638	0.474
GBX2 M05266_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_1	0.638	0.474
GBX2 M05267_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_2	0.638	0.474
GBX2 M05269_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_1	0.638	0.474
GBX2 M05270_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_2	0.638	0.474
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.635	0.474
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.635	0.474
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.635	0.474
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.635	0.474
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.635	0.474
KLLA0_D10043g M02140_2.00	Kluyveromyces lactis	NNNNWWNNNN	NNNNWWNNNN	PBM Weirauch et al.(2014) pTH6070	0.634	0.333
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.631	0.474
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.631	0.474
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.631	0.474
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.631	0.456
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.631	0.456
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.631	0.456
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.630	0.509
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.629	0.491
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.629	0.491
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.629	0.491
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.629	0.491
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.629	0.491
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.629	0.491
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.629	0.491
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.629	0.491
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_2	0.629	0.491
BARHL2 M05167_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_1	0.629	0.491
BARHL2 M05168_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_2	0.629	0.491
BARHL2 M05166_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_Methyl-HT-SELEX	0.629	0.491
BARHL2 M05169_2.00	Homo sapiens	NTAAWTGN	NCAWTTAN	SELEX Yin et al.(2017) BARHL2_FL_Methyl-HT-SELEX	0.629	0.491
Hoxa1 M00450_2.00	Mus musculus	NHRATKRNN	NNYMATYDN	PBM Berger et al.(2008) Hoxa1_3425	0.627	0.491
HOXA1 M03096_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) HOXA1_1	0.627	0.491
HOXA1 M04959_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_HT-SELEX	0.627	0.491
HOXA1 M09133_2.00	Homo sapiens	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_HUMAN.H11MO.0.C	0.627	0.491
Hoxa1 M09196_2.00	Mus musculus	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_MOUSE.H11MO.0.C	0.627	0.491
HOXA1 M04960_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_1	0.627	0.491
HOXA1 M04961_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_2	0.627	0.491
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.624	0.491
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.619	0.474
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.619	0.456
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.619	0.456
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.619	0.456
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.619	0.456
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.619	0.456
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.619	0.456
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.619	0.456
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.619	0.456
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.619	0.456
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.619	0.456
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.619	0.456
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.619	0.456
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.619	0.456
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.619	0.456
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.619	0.456
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.619	0.456
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.619	0.456
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.619	0.456
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.619	0.456
CG18599 M06539_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0177.1	0.619	0.474
CG18599 M06354_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) CG18599_Cell_FBgn0038592	0.619	0.474
CG18599 M06355_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) CG18599_SOLEXA_FBgn0038592	0.619	0.474
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.619	0.491
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.619	0.491
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.619	0.491
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.619	0.491
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.619	0.491
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.619	0.491
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.619	0.491
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.619	0.491
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.619	0.474
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.619	0.474
Gsx2 M00469_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Gsh2_3990	0.619	0.456
GSX1 M03205_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX1_1	0.619	0.456
GSX2 M03227_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX2_1	0.619	0.456
GSX1 M05271_2.00	Homo sapiens	NYMATNRN	NYNATKRN	SELEX Yin et al.(2017) GSX1_eDBD_HT-SELEX	0.619	0.456
GSX2 M05329_2.00	Homo sapiens	HTAATKRS	SYMATTAD	SELEX Yin et al.(2017) GSX2_eDBD_HT-SELEX	0.619	0.456
ind M06527_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0228.1	0.619	0.456
ind M06329_2.00	Drosophila melanogaster	YVYTAATKA	TMATTARBR	B1H Zhu et al.(2011) Ind_Cell_FBgn0025776	0.619	0.456
GSX1 M05272_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GSX1_eDBD_Methyl-HT-SELEX	0.619	0.456
GSX2 M05330_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GSX2_eDBD_Methyl-HT-SELEX	0.619	0.456
pb M03872_2.00	Drosophila melanogaster	NTRAYKRY	RYMRTYAN	SELEX Nitta et al.(2015) pb_1	0.618	0.509
pb M06545_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0238.1	0.618	0.509
pb M06366_2.00	Drosophila melanogaster	BYTAATKA	TMATTARV	B1H Zhu et al.(2011) Pb_Cell_FBgn0051481	0.618	0.509
pb M06367_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Pb_SOLEXA_FBgn0051481	0.618	0.509
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.617	0.509
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.617	0.509
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.617	0.509
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.617	0.509
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.617	0.509
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.617	0.509
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.617	0.509
NANOG M05015_2.00	Homo sapiens	NYRABBVB	VBVVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_HT-SELEX	0.617	0.509
NANOG M09139_2.00	Homo sapiens	NTYWRCATNWSAAWRVN	NBYWTTSWNATGYWRAN	Misc Kulakovskiy et al.(2013) NANOG_HUMAN.H11MO.0.A	0.617	0.509
NANOG M10664_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_01	0.617	0.509
NANOG M10665_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_02	0.617	0.509
NANOG M10666_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_05	0.617	0.509
NANOG M10667_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_07	0.617	0.509
NANOG M10668_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q3	0.617	0.509
NANOG M10669_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q6	0.617	0.509
NANOG M05016_2.00	Homo sapiens	NHAAYGH	DCRTTDN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_1	0.617	0.509
NANOG M05017_2.00	Homo sapiens	NYRABKRN	NYMVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_2	0.617	0.509
PHDP M03849_2.00	Drosophila melanogaster	NTAATKNVATTAN	NTAATBNMATTAN	SELEX Nitta et al.(2015) PHDP_1	0.615	0.439
PHDP M06525_2.00	Drosophila melanogaster	HTAATTD	HAATTAD	B1H Mathelier et al.(2014) MA0457.1	0.615	0.439
PHDP M06325_2.00	Drosophila melanogaster	HTAATT	AATTAD	B1H Zhu et al.(2011) PhdP_Cell_FBgn0025334	0.615	0.439
PHDP M06326_2.00	Drosophila melanogaster	YTAATT	AATTAR	B1H Zhu et al.(2011) PhdP_SOLEXA_FBgn0025334	0.615	0.439
Hoxd1 M00492_2.00	Mus musculus	NRATNDNN	NNHNATYN	PBM Berger et al.(2008) Hoxd1_3448	0.615	0.474
HOXB1 M05057_2.00	Homo sapiens	NTAATTAS	STAATTAN	SELEX Yin et al.(2017) HOXB1_eDBD_HT-SELEX	0.615	0.474
HOXD1 M05098_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_HT-SELEX	0.615	0.474
Hoxd1 M10768_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD1_03	0.615	0.474
HOXB1 M05058_2.00	Homo sapiens	GTAATBAN	NTVATTAC	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_1	0.615	0.474
HOXB1 M05059_2.00	Homo sapiens	NTRAYGMB	VKCRTYAN	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_2	0.615	0.474
HOXD1 M05099_2.00	Homo sapiens	BTAATKAV	BTMATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_1	0.615	0.474
HOXD1 M05100_2.00	Homo sapiens	NTWAYGAB	VTCRTWAN	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_2	0.615	0.474
O76842_CUPSA M02199_2.00	Cupiennius salei	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6251	0.615	0.456
lab M03797_2.00	Drosophila melanogaster	NTAATTAS	STAATTAN	SELEX Nitta et al.(2015) lab_1	0.615	0.456
lab M06493_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0230.1	0.615	0.456
lab M06260_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Zhu et al.(2011) Lab_Cell_FBgn0002522	0.615	0.456
lab M06261_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Lab_SOLEXA_FBgn0002522	0.615	0.456
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.614	0.456
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.614	0.439
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.614	0.439
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.614	0.439
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.614	0.439
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.614	0.439
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.614	0.439
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.614	0.439
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.614	0.439
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.614	0.439
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.614	0.439
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.614	0.439
PHOX2B M00279_2.00	Homo sapiens	NVTAATTRMNN	NNKYAATTABN	PBM Barrera et al.(2016) PHOX2B_R100L	0.614	0.439
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.614	0.439
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.614	0.439
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.614	0.439
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.614	0.439
Nanog M02098_2.00	Mus musculus	NHDAYNDNN	NNHNRTHDN	PBM Weirauch et al.(2014) pTH5685	0.613	0.491
Nanog M09176_2.00	Mus musculus	HTYWRMAWNWSAAWRVV	BBYWTTSWNWTKYWRAD	Misc Kulakovskiy et al.(2013) NANOG_MOUSE.H11MO.0.A	0.613	0.491
Nanog M09565_2.00	Mus musculus	BYTRATKGSY	RSCMATYARV	Misc Heinz et al.(2010) mES-Nanog_GSE11724	0.613	0.491
Isx M00452_2.00	Mus musculus	NNHDATNN	NNATHDNN	PBM Berger et al.(2008) Isx_3445	0.613	0.404
ISX M00319_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_REF	0.612	0.404
ISX M03218_2.00	Homo sapiens	NTAATTARATTAN	NTAATYTAATTAN	SELEX Jolma et al.(2013) ISX_1	0.612	0.404
ISX M03219_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Jolma et al.(2013) ISX_2	0.612	0.404
ISX M03220_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) ISX_3	0.612	0.404
ISX M05304_2.00	Homo sapiens	BTAATTRG	CYAATTAV	SELEX Yin et al.(2017) ISX_eDBD_HT-SELEX	0.612	0.404
ISX M05307_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_HT-SELEX	0.612	0.404
ISX M05305_2.00	Homo sapiens	NTAATTAG	CTAATTAN	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_1	0.612	0.404
ISX M05306_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_2	0.612	0.404
ISX M05308_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_1	0.612	0.404
ISX M05309_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_2	0.612	0.404
eve M00556_2.00	Drosophila melanogaster	NNTAATTARN	NYTAATTANN	PBM Busser et al.(2012a) Eve	0.611	0.421
eve M02115_2.00	Drosophila melanogaster	NTAATNDNN	NNHNATTAN	PBM Weirauch et al.(2014) pTH6436	0.611	0.421
eve M03794_2.00	Drosophila melanogaster	VYTAATKASN	NSTMATTARB	SELEX Nitta et al.(2015) eve_1	0.611	0.421
eve M06486_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0221.1	0.611	0.421
eve M06240_2.00	Drosophila melanogaster	DYTAATKA	TMATTARH	B1H Zhu et al.(2011) Eve_Cell_FBgn0000606	0.611	0.421
eve M06241_2.00	Drosophila melanogaster	HKBTAAYNDTKY	RMAHNRTTAVMD	B1H Zhu et al.(2011) eve_FlyReg_FBgn0000606	0.611	0.421
eve M06242_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Eve_SOLEXA_FBgn0000606	0.611	0.421
eve M09678_2.00	Drosophila melanogaster	NKHTAATKD	HMATTADMN	Misc Kulakovskiy et al.(2009) eve	0.611	0.421
eve M10786_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EVE_Q6	0.611	0.421
VSX2 M00287_2.00	Homo sapiens	NYTAATTARN	NYTAATTARN	PBM Barrera et al.(2016) VSX2_REF	0.611	0.368
VSX2 M03124_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX2_1	0.611	0.368
VSX2 M05036_2.00	Homo sapiens	CTAATTAN	NTAATTAG	SELEX Yin et al.(2017) VSX2_eDBD_HT-SELEX	0.611	0.368
VSX2 M05039_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_HT-SELEX	0.611	0.368
Vsx2 M09180_2.00	Mus musculus	NNRGCTAATTAR	YTAATTAGCYNN	Misc Kulakovskiy et al.(2013) VSX2_MOUSE.H11MO.0.C	0.611	0.368
VSX2 M10676_2.00	Homo sapiens	HNNGCTAATTANBN	NVNTAATTAGCNND	Transfac Matys et al.(2006) V$CHX10_01	0.611	0.368
VSX2 M05037_2.00	Homo sapiens	VYAATTRR	YYAATTRB	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_1	0.611	0.368
VSX2 M05038_2.00	Homo sapiens	NTAAYKHN	NDMRTTAN	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_2	0.611	0.368
VSX2 M05040_2.00	Homo sapiens	NTAAYKVN	NBMRTTAN	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_1	0.611	0.368
VSX2 M05041_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_2	0.611	0.368
VSX2 M00285_2.00	Homo sapiens	NDTWTATTHNNN	NNNDAATAWAHN	PBM Barrera et al.(2016) VSX2_R200P	0.611	0.351
VSX2 M00286_2.00	Homo sapiens	YRWKWNN	NNWMWYR	PBM Barrera et al.(2016) VSX2_R200Q	0.611	0.351
Vsx2 M02130_2.00	Drosophila melanogaster	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6195	0.609	0.351
Vsx2 M03880_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Vsx2_1	0.609	0.351
Vsx2 M03881_2.00	Drosophila melanogaster	HRAYNVNNTRATKD	HMATYANNBNRTYD	SELEX Nitta et al.(2015) Vsx2_2	0.609	0.351
Vsx2 M06553_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Mathelier et al.(2014) MA0180.1	0.609	0.351
Vsx2 M06382_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Zhu et al.(2011) CG33980_Cell_FBgn0053980	0.609	0.351
Vsx2 M06383_2.00	Drosophila melanogaster	NNTAATTRRN	NYYAATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_0_FBgn0053980	0.609	0.351
Vsx2 M06384_2.00	Drosophila melanogaster	NNTAATKDN	NHMATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_10_FBgn0053980	0.609	0.351
Vsx2 M06385_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) CG33980_SOLEXA_FBgn0053980	0.609	0.351
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.609	0.456
Smp_158000 M02170_2.00	Schistosoma mansoni	TTAATTRG	CYAATTAA	PBM Weirauch et al.(2014) pTH5672	0.608	0.474
Emx2 M00495_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Emx2_3420	0.607	0.509
EMX2 M03210_2.00	Homo sapiens	NBTAATTANN	NNTAATTAVN	SELEX Jolma et al.(2013) EMX2_1	0.607	0.509
EMX2 M03211_2.00	Homo sapiens	YMATTARBTAATKR	YMATTAVYTAATKR	SELEX Jolma et al.(2013) EMX2_2	0.607	0.509
EMX2 M05281_2.00	Homo sapiens	YTAATKAB	VTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_HT-SELEX	0.607	0.509
EMX2 M05282_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_Methyl-HT-SELEX	0.607	0.509
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.607	0.491
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.607	0.491
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.607	0.491
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.607	0.491
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.607	0.491
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.607	0.491
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.607	0.491
HOXA2 M02083_2.00	Homo sapiens	NNNDHHNNN	NNNDDHNNN	PBM Weirauch et al.(2014) pTH5887	0.607	0.491
Hoxa2 M00403_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa2_3079	0.607	0.491
HOXA2 M03097_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXA2_1	0.607	0.491
HOXB2 M03213_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) HOXB2_1	0.607	0.491
Hoxa2 M03251_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxa2_1	0.607	0.491
HOXA2 M04962_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_HT-SELEX	0.607	0.491
HOXA2 M04965_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_HT-SELEX	0.607	0.491
HOXB2 M05292_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB2_eDBD_HT-SELEX	0.607	0.491
Hoxa2 M09566_2.00	Mus musculus	DTGATKGATKDB	VHMATCMATCAH	Misc Heinz et al.(2010) mES-Hoxa2_Donaldson_et_al.	0.607	0.491
HOXA2 M04963_2.00	Homo sapiens	NTAATTAN	NTAATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_1	0.607	0.491
HOXA2 M04964_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_2	0.607	0.491
HOXA2 M04966_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_1	0.607	0.491
HOXA2 M04967_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_2	0.607	0.491
HOXB2 M05293_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_1	0.607	0.491
HOXB2 M05294_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_2	0.607	0.491
NEMVEDRAFT_v1g81309 M02152_2.00	Nematostella vectensis	NTAATDNNN	NNNHATTAN	PBM Weirauch et al.(2014) pTH5477	0.606	0.456
ARX M00261_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) ARX_P353L	0.605	0.474
hbn M03813_2.00	Drosophila melanogaster	HTAATYTAATTAD	HTAATTARATTAD	SELEX Nitta et al.(2015) hbn_1	0.605	0.404
hbn M06506_2.00	Drosophila melanogaster	TTAATTR	YAATTAA	B1H Mathelier et al.(2014) MA0226.1	0.605	0.404
hbn M06291_2.00	Drosophila melanogaster	TWAWTTR	YAAWTWA	B1H Zhu et al.(2011) Hbn_Cell_FBgn0008636	0.605	0.404
hbn M06292_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Hbn_SOLEXA_FBgn0008636	0.605	0.404
ARX M00264_2.00	Homo sapiens	NNWRATNNN	NNNATYWNN	PBM Barrera et al.(2016) ARX_REF	0.605	0.456
Arx M00467_2.00	Mus musculus	NTAATTDN	NHAATTAN	PBM Berger et al.(2008) Arx_1738	0.605	0.456
ARX M03076_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ARX_1	0.605	0.456
Arx M03269_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Arx_1	0.605	0.456
ARX M04895_2.00	Homo sapiens	BTAATTRR	YYAATTAV	SELEX Yin et al.(2017) ARX_eDBD_HT-SELEX	0.605	0.456
Arx M10775_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARX_05	0.605	0.456
ARX M00262_2.00	Homo sapiens	ATAATTAT	ATAATTAT	PBM Barrera et al.(2016) ARX_P353R	0.605	0.456
ARX M04896_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ARX_eDBD_Methyl-HT-SELEX	0.605	0.456
ARX M00260_2.00	Homo sapiens	NMTAATTANNN	NNNTAATTAKN	PBM Barrera et al.(2016) ARX_L343Q	0.605	0.439
OdsH M03851_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) OdsH_1	0.605	0.386
OdsH M03852_2.00	Drosophila melanogaster	TAATBNVATTA	TAATBNVATTA	SELEX Nitta et al.(2015) OdsH_2	0.605	0.386
OdsH M06528_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0198.1	0.605	0.386
OdsH M06330_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Zhu et al.(2011) Odsh_Cell_FBgn0026058	0.605	0.386
OdsH M06331_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Odsh_SOLEXA_FBgn0026058	0.605	0.386
unc-4 M03846_2.00	Drosophila melanogaster	TAATTNAATTA	TAATTNAATTA	SELEX Nitta et al.(2015) unc-4_1	0.604	0.386
unc-4 M06523_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0250.1	0.604	0.386
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.601	0.474
repo M03826_2.00	Drosophila melanogaster	VTTAATTARB	VYTAATTAAB	SELEX Nitta et al.(2015) repo_1	0.601	0.386
repo M03827_2.00	Drosophila melanogaster	VKYAATTRRN	NYYAATTRMB	SELEX Nitta et al.(2015) repo_2	0.601	0.386
repo M03828_2.00	Drosophila melanogaster	VBYAATTRVNNBYAATTRVB	VBYAATTRVNNBYAATTRVB	SELEX Nitta et al.(2015) repo_3	0.601	0.386
repo M06511_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0240.1	0.601	0.386
repo M06301_2.00	Drosophila melanogaster	DTTAATTA	TAATTAAH	B1H Zhu et al.(2011) Repo_Cell_FBgn0011701	0.601	0.386
repo M06302_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Repo_SOLEXA_FBgn0011701	0.601	0.386
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.600	0.386
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.600	0.386
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.600	0.386
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.600	0.386
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.600	0.386
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.600	0.386
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.600	0.386
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.600	0.386
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.600	0.386
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.600	0.386
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.600	0.386
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.600	0.386
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.600	0.368
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.600	0.368
SHOX M02095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5805	0.600	0.404
Shox2 M00439_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Shox2_2641	0.600	0.404
SHOX M03232_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) SHOX_1	0.600	0.404
SHOX2 M03204_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) SHOX2_1	0.600	0.404
Shox2 M03263_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Shox2_1	0.600	0.404
CG5369 M03876_2.00	Drosophila melanogaster	TAATTHVATTA	TAATBDAATTA	SELEX Nitta et al.(2015) CG5369_1	0.600	0.404
CG5369 M03877_2.00	Drosophila melanogaster	TAATTRNNTAATBN	NVATTANNYAATTA	SELEX Nitta et al.(2015) CG5369_2	0.600	0.404
CG5369 M03878_2.00	Drosophila melanogaster	TAATTVRATWA	TWATYBAATTA	SELEX Nitta et al.(2015) CG5369_3	0.600	0.404
SHOX M05366_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_HT-SELEX	0.600	0.404
Shox2 M10772_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SHOX2_05	0.600	0.404
SHOX M05367_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_1	0.600	0.404
SHOX M05368_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_2	0.600	0.404
Uncx M00443_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Uncx4	0.600	0.368
uncx M02111_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5474	0.600	0.368
UNCX M03191_2.00	Homo sapiens	NWAATTVVRTHWN	NWDAYBBAATTWN	SELEX Jolma et al.(2013) UNCX_1	0.600	0.368
UNCX M03192_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) UNCX_2	0.600	0.368
Uncx M03264_2.00	Mus musculus	NTAATTVRATTAN	NTAATYBAATTAN	SELEX Jolma et al.(2013) Uncx_1	0.600	0.368
Uncx M03265_2.00	Mus musculus	NTAATTRR	YYAATTAN	SELEX Jolma et al.(2013) Uncx_2	0.600	0.368
UNCX M05240_2.00	Homo sapiens	NYAATTRV	BYAATTRN	SELEX Yin et al.(2017) UNCX_eDBD_HT-SELEX	0.600	0.368
UNCX M05241_2.00	Homo sapiens	NYRRYKNN	NNMRYYRN	SELEX Yin et al.(2017) UNCX_eDBD_Methyl-HT-SELEX	0.600	0.368
al M03776_2.00	Drosophila melanogaster	TAAYBNVRTTA	TAAYBNVRTTA	SELEX Nitta et al.(2015) al_1	0.600	0.421
al M06477_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0208.1	0.600	0.421
al M06212_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) Al_Cell_FBgn0000061	0.600	0.421
al M06213_2.00	Drosophila melanogaster	NNYTAATTR	YAATTARNN	B1H Zhu et al.(2011) Al_SOLEXA_FBgn0000061	0.600	0.421
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSFALP00000010701	Homeodomain	24	80	RKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK

Links
Other Homeodomain family TFs
Other *Ficedula albicollis* TFs

4992 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000004660	Ailuropoda melanoleuca	ENSAMEG00000004660	N
ENSAMEG00000004942	Ailuropoda melanoleuca	ENSAMEG00000004942	I
Alligator_sinensis_CCG014496.1	Alligator sinensis	Alligator_sinensis_CCG014496.1	I
ANCCAN_10593	Ancylostoma caninum	ANCCAN_10593	I
ASIM_0001230001	Anisakis simplex	ASIM_0001230001	I
ENSACAG00000002147	Anolis carolinensis	ENSACAG00000002147	I
ACUA004306	Anopheles culicifacies	ACUA004306	I
ACUA026833	Anopheles culicifacies	ACUA026833	I
ADAC001468	Anopheles darlingi	ADAC001468	I
ADAC008104	Anopheles darlingi	ADAC008104	I
AFAF008499	Anopheles farauti	AFAF008499	I
AMAM000848	Anopheles maculatus	AMAM000848	I
ASTEI06918	Anopheles stephensi	ASTEI06918	N
ALUE_0000848601	Ascaris lumbricoides	ALUE_0000848601	I
ALUE_0001497801	Ascaris lumbricoides	ALUE_0001497801	I
BGLB004491	Biomphalaria glabrata	BGLB004491	I
BGLB009341	Biomphalaria glabrata	BGLB009341	I
BGLB013824	Biomphalaria glabrata	BGLB013824	I
BGIBMGA003233	Bombyx mori	BGIBMGA003233	I
ENSBTAP00000009672-D1	Bos grunniens	ENSBTAP00000009672-D1	I
ENSP00000360811-D1	Bos grunniens	ENSP00000360811-D1	I
ENSP00000419457-D1	Bos grunniens	ENSP00000419457-D1	I
DLX4	Bos taurus	ENSBTAG00000007353	I
DLX3	Bos taurus	ENSBTAG00000017409	I	0.839
fgenesh2_pg.scaffold_23000163	Branchiostoma floridae	fgenesh2_pg.scaffold_23000163	I
DBX1	Callithrix jacchus	ENSCJAG00000006734	I
NOBOX	Callithrix jacchus	ENSCJAG00000009917	I
Aan_R011917	Calypte anna	Aan_R011917	I
Cflo_02794--XP_001120105.1_APIME	Camponotus floridanus	Cflo_02794--XP_001120105.1_APIME	I
Cflo_04174--XP_001120833.1_APIME	Camponotus floridanus	Cflo_04174--XP_001120833.1_APIME	I
NOBOX	Canis familiaris	ENSCAFG00000003500	I
PRRX2	Cavia porcellus	ENSCPOG00000021821	I
Cmyd_10001740	Chelonia mydas	Cmyd_10001740	I
Cmyd_10012400	Chelonia mydas	Cmyd_10012400	I
ENSCSAG00000007090	Chlorocebus sabaeus	ENSCSAG00000007090	I
CLEC007171	Cimex lectularius	CLEC007171	I
ENSCSAVG00000000940	Ciona savignyi	ENSCSAVG00000000940	I
CGI_10009720	Crassostrea gigas	CGI_10009720	I
CGI_10016653	Crassostrea gigas	CGI_10016653	I
YQE_10100	Dendroctonus ponderosae	YQE_10100	I
DICVIV_02647	Dictyocaulus viviparus	DICVIV_02647	I
Dbx1	Dipodomys ordii	ENSDORG00000009286	N
GF12207	Drosophila ananassae	FBgn0089246	I
GF13343	Drosophila ananassae	FBgn0090375	I
GK22877	Drosophila willistoni	FBgn0224839	I
ECANG7_01330	Echinococcus canadensis	ECANG7_01330	I
DBX1	Echinops telfairi	ENSETEG00000017576	N
EEL_0000220001	Elaeophora elaphi	EEL_0000220001	I
EVEC_0000357701	Enterobius vermicularis	EVEC_0000357701	I
EVEC_0000536401	Enterobius vermicularis	EVEC_0000536401	N
NOBOX	Equus caballus	ENSECAG00000003123	I
NOBOX	Felis catus	ENSFCAG00000004352	I
ENSFCAG00000029037	Felis catus	ENSFCAG00000029037	I
Gfo_R002825	Geospiza fortis	Gfo_R002825	I
LHX6	Gorilla gorilla	ENSGGOG00000008310	I
DBX1	Gorilla gorilla	ENSGGOG00000014848	N
NOBOX	Gorilla gorilla	ENSGGOG00000022185	I
HCOI01026600	Haemonchus contortus	HCOI01026600	I
HPLM_0000971301	Haemonchus placei	HPLM_0000971301	I
HPLM_0001894101	Haemonchus placei	HPLM_0001894101	I
HMEL006244	Heliconius melpomene	HMEL006244	I
HPBE_0000873701	Heligmosomoides bakeri	HPBE_0000873701	I
HelroG173001	Helobdella robusta	HelroG173001	I
NOBOX	Homo sapiens	ENSG00000106410	D
HESX1	Homo sapiens	ENSG00000163666	D
TTAC_0000027101	Hydatigera taeniaeformis	TTAC_0000027101	I
TTAC_0000701101	Hydatigera taeniaeformis	TTAC_0000701101	N
TTAC_0001021101	Hydatigera taeniaeformis	TTAC_0001021101	N
HDID_0000333701	Hymenolepis diminuta	HDID_0000333701	N
HNAJ_0000529701	Hymenolepis nana	HNAJ_0000529701	N
ENSSTOG00000026570	Ictidomys tridecemlineatus	ENSSTOG00000026570	I
ENSLACG00000001487	Latimeria chalumnae	ENSLACG00000001487	I
LDEC008146	Leptinotarsa decemlineata	LDEC008146	I
ENSMMUP00000027138	Macaca fascicularis	ENSMMUP00000027138	I
NOBOX	Macaca mulatta	ENSMMUG00000020609	I
ENSMGAG00000013900	Meleagris gallopavo	ENSMGAG00000013900	I
MCINX007054	Melitaea cinxia	MCINX007054	I
MCINX008871	Melitaea cinxia	MCINX008871	I
MCOS_0000004601	Mesocestoides corti	MCOS_0000004601	I
MCOS_0000655901	Mesocestoides corti	MCOS_0000655901	N
DBX1	Microcebus murinus	ENSMICG00000017111	N
ENSMODG00000001675	Monodelphis domestica	ENSMODG00000001675	I
ENSMPUG00000007079	Mustela putorius furo	ENSMPUG00000007079	I
Myotis_brandtii_NOBOX_10026198	Myotis brandtii	Myotis_brandtii_NOBOX_10026198	I
NOBOX	Myotis lucifugus	ENSMLUG00000004209	I
DLX4	Myotis lucifugus	ENSMLUG00000007268	I
NECAME_16530	Necator americanus	NECAME_16530	I
NBR_0000705501	Nippostrongylus brasiliensis	NBR_0000705501	I
ENSNLEG00000003406	Nomascus leucogenys	ENSNLEG00000003406	I
ENSNLEG00000017811	Nomascus leucogenys	ENSNLEG00000017811	N
DBX1	Ochotona princeps	ENSOPRG00000012954	N
OESDEN_01216	Oesophagostomum dentatum	OESDEN_01216	I
SNAPOd2T00016706001	Oikopleura dioica	SNAPOd2T00016706001	I
Ogr00185	Ophisaurus gracilis	Ogr00185	N
Ogr03859	Ophisaurus gracilis	Ogr03859	I
Ogr09065	Ophisaurus gracilis	Ogr09065	I
T265_02852	Opisthorchis viverrini	T265_02852	I
T265_14002	Opisthorchis viverrini	T265_14002	I
NOBOX	Oryctolagus cuniculus	ENSOCUG00000001027	I
DLX4	Oryctolagus cuniculus	ENSOCUG00000022067	I
NOBOX	Otolemur garnettii	ENSOGAG00000010413	I
ENSOARG00000005572	Ovis aries	ENSOARG00000005572	I
DBX1	Pan troglodytes	ENSPTRG00000003437	N
NOBOX	Pan troglodytes	ENSPTRG00000019828	I
ENSPANG00000018829	Papio anubis	ENSPANG00000018829	I
PEQ_0001388201	Parascaris equorum	PEQ_0001388201	I
ENSPSIG00000014030	Pelodiscus sinensis	ENSPSIG00000014030	I
PPAI007004	Phlebotomus papatasi	PPAI007004	I
Pvit_13361	Pogona vitticeps	Pvit_13361	I
ENSPPYG00000003422	Pongo abelii	ENSPPYG00000003422	N
DBX1	Procavia capensis	ENSPCAG00000004905	N
nRc.2.0.1.g34428	Romanomermis culicivorax	nRc.2.0.1.g34428	I
nRc.2.0.1.g35501	Romanomermis culicivorax	nRc.2.0.1.g35501	I
SSLN_0001460801	Schistocephalus solidus	SSLN_0001460801	I
SROB_0001564301	Schistosoma rodhaini	SROB_0001564301	I
SINV13346	Solenopsis invicta	SINV13346	I
L892_g24303	Steinernema scapterisci	L892_g24303	I
SPU_004366	Strongylocentrotus purpuratus	SPU_004366	I
SVUK_0001056001	Strongylus vulgaris	SVUK_0001056001	I
meox1	Takifugu rubripes	ENSTRUG00000005193	I	0.639
drgx	Takifugu rubripes	ENSTRUG00000013446	I
ENSTSYG00000000516	Tarsius syrichta	ENSTSYG00000000516	I
ENSTSYG00000014450	Tarsius syrichta	ENSTSYG00000014450	I
TELCIR_07728	Teladorsagia circumcincta	TELCIR_07728	I
TELCIR_10796	Teladorsagia circumcincta	TELCIR_10796	I
tetur02g13510	Tetranychus urticae	tetur02g13510	I
tetur14g02510	Tetranychus urticae	tetur14g02510	I
TCNE_0000653501	Toxocara canis	TCNE_0000653501	I
TCNE_0001081001	Toxocara canis	TCNE_0001081001	I
TC000483	Tribolium castaneum	TC000483	I
D917_01051	Trichinella nativa	D917_01051	I
EFV55592	Trichinella spiralis	EFV55592	I
EFV57629	Trichinella spiralis	EFV57629	I
TTRE_0000072001	Trichuris trichiura	TTRE_0000072001	I
DBX1	Tursiops truncatus	ENSTTRG00000000318	N
L798_06393	Zootermopsis nevadensis	L798_06393	I
L798_11440	Zootermopsis nevadensis	L798_11440	I

ENSFALG00000010263 (Ficedula albicollis) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

4992 Related TFs

ENSFALG00000010263 **(Ficedula albicollis)
Homeodomain**