ENSLACG00000016442 (Latimeria chalumnae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLACG00000016442 T210902_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx1
M09213_2.00 		Mus musculus
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A 		0.816 0.913
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000018673 Homeodomain 238 286
ENSLACP00000018674 Homeodomain 170 218

Links

Other Homeodomain family TFs
Other Latimeria chalumnae TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_11361 Ancylostoma ceylanicum ANCCEY_11361 I 0.662
ANCDUO_01775 Ancylostoma duodenale ANCDUO_01775 I 0.727
ACOC_0000393801 Angiostrongylus costaricensis ACOC_0000393801 I 0.682
ENSACAG00000003721 Anolis carolinensis ENSACAG00000003721 I 0.814
AEPI008243 Anopheles epiroticus AEPI008243 I 0.678
Brh_R010078 Buceros rhinoceros Brh_R010078 I 0.809
CBG26065 Caenorhabditis briggsae CBG26065 I 0.613
CABZ01017151.1 Danio rerio ENSDARG00000104156 I 0.816
PBX1 Echinops telfairi ENSETEG00000019309 I 0.663
D915_05491 Fasciola hepatica D915_05491 I 0.811
ENSGMOG00000006428 Gadus morhua ENSGMOG00000006428 I 0.814
PBX1 Homo sapiens ENSG00000185630 D 0.816
HmN_000400100 Hymenolepis microstoma HmN_000400100 I 0.680
ENSSTOG00000013679 Ictidomys tridecemlineatus ENSSTOG00000013679 I 0.814
ENSLOCG00000006841 Lepisosteus oculatus ENSLOCG00000006841 I 0.833
LDEC006593 Leptinotarsa decemlineata LDEC006593 I 0.723
ENSMEUG00000002971 Macropus eugenii ENSMEUG00000002971 I 0.809
ENSMEUG00000006330 Macropus eugenii ENSMEUG00000006330 I 0.816
MESCA000707 Megaselia scalaris MESCA000707 I 0.750
MhA1_Contig138.frz3.gene24 Meloidogyne hapla MhA1_Contig138.frz3.gene24 I 0.656
MDOA002143 Musca domestica MDOA002143 I 0.750
Pbx1 Mus musculus ENSMUSG00000052534 D 0.816
fgenesh1_pg.C_scaffold_1001003 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1001003 I 0.609
Myotis_brandtii_MIMI_L668_10004071 Myotis brandtii Myotis_brandtii_MIMI_L668_10004071 I 0.603
Myotis_brandtii_MIMI_R196_10004074 Myotis brandtii Myotis_brandtii_MIMI_R196_10004074 I 0.603
UCRNP2_7717 Neofusicoccum parvum UCRNP2_7717 I 0.599
Ogr15448 Ophisaurus gracilis Ogr15448 I 0.814
PBX4 Oryctolagus cuniculus ENSOCUG00000029208 I 0.808
PBX1 Oryzias latipes ENSORLG00000016702 I 0.849
PPAI000859 Phlebotomus papatasi PPAI000859 I 0.750
PXEA_0001880101 Protopolystoma xenopodis PXEA_0001880101 I 0.674
MYCFIDRAFT_76128 Pseudocercospora fijiensis MYCFIDRAFT_76128 I 0.609
A_00975 Schistosoma haematobium A_00975 I 0.811
SVUK_0000462001 Strongylus vulgaris SVUK_0000462001 I 0.802
SVUK_0001050601 Strongylus vulgaris SVUK_0001050601 I 0.644
TELCIR_02026 Teladorsagia circumcincta TELCIR_02026 I 0.739
PBX3 Tupaia belangeri ENSTBEG00000016855 I 0.814