OPUNC01G06180 (Oryza punctata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OPUNC01G06180 T221706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.780 0.860
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.780 0.860
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.780 0.860
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.775 0.860
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.775 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC01G06180.1 Homeodomain 3 63

Links

Other Homeodomain family TFs
Other Oryza punctata TFs

330 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N
Ca_21138 Cicer arietinum Ca_21138 N
Cla018179 Citrullus lanatus Cla018179 N
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N
Cucsa.175500 Cucumis sativus Cucsa.175500 N
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N
Eucgr.G02940 Eucalyptus grandis Eucgr.G02940 N
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N
Eucgr.J01244 Eucalyptus grandis Eucgr.J01244 N
GLYMA18G39920 Glycine max GLYMA18G39920 N
GLYMA07G15950 Glycine max GLYMA07G15950 N
GLYMA03G10320 Glycine max GLYMA03G10320 N
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N
Lus10023404.g Linum usitatissimum Lus10023404.g N
Lus10024384.g Linum usitatissimum Lus10024384.g N
Lus10040284.g Linum usitatissimum Lus10040284.g N
cassava15723.m1 Manihot esculenta cassava15723.m1 N
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N
MTR_7g062120 Medicago truncatula MTR_7g062120 N
mgf014897m Mimulus guttatus mgf014897m N
mgf011165m Mimulus guttatus mgf011165m N
OBART03G30260 Oryza barthii OBART03G30260 N
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N
BGIOSGA010017 Oryza indica BGIOSGA010017 N
OMERI03G26460 Oryza meridionalis OMERI03G26460 N
ONIVA03G31510 Oryza nivara ONIVA03G31510 N
OPUNC03G27510 Oryza punctata OPUNC03G27510 N
OS03G0690600 Oryza sativa OS03G0690600 N
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N
XM_002316242.1 Populus trichocarpa POPTR_0010s20980 N
Pm018822 Prunus mume Pm018822 N
Pm002685 Prunus mume Pm002685 N
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N
29767.m000200 Ricinus communis 29767.m000200 N
27568.m000253 Ricinus communis 27568.m000253 N
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N
Si034417m.g Setaria italica Si034417m.g N
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N
Solyc05g053090.1 Solanum lycopersicum Solyc05g053090.1 N
Solyc04g011630.1 Solanum lycopersicum Solyc04g011630.1 N
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N
Sb01g039670 Sorghum bicolor Sb01g039670 N
TCM_021920 Theobroma cacao TCM_021920 N
TCM_042705 Theobroma cacao TCM_042705 N
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N
GRMZM2G098784 Zea mays GRMZM2G098784 N
GRMZM2G049159 Zea mays GRMZM2G049159 N