CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAM018342
(
Anopheles maculatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AMAM018342
T231930_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.744
0.400
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.744
0.400
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.744
0.400
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.744
0.400
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.744
0.400
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.744
0.400
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.744
0.400
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.744
0.400
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.744
0.400
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.737
0.444
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.737
0.444
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.737
0.444
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAM018342-PA
Homeodomain
13
57
RRPRTAFTSQQLLELEKQFKVSKYLSRPKRYEVANNLLLSETQVS
Links
Other
Homeodomain
family TFs
Other
Anopheles maculatus
TFs
1238 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_kg.C_130080
Fragilariopsis cylindrus
estExt_fgenesh2_kg.C_130080
N
0.000
fgenesh2_pg.4_#_1036
Fragilariopsis cylindrus
fgenesh2_pg.4_#_1036
N
0.000
fgenesh2_pg.7_#_214
Fragilariopsis cylindrus
fgenesh2_pg.7_#_214
N
0.000
Phatr3_J33840
Phaeodactylum tricornutum
Phatr3_J33840
N
0.000
Phatr3_J49506
Phaeodactylum tricornutum
Phatr3_J49506
N
0.000
Phatr3_J49937
Phaeodactylum tricornutum
Phatr3_J49937
N
0.000
Phatr3_J49938
Phaeodactylum tricornutum
Phatr3_J49938
N
0.000
Phatr3_J50240
Phaeodactylum tricornutum
Phatr3_J50240
N
0.000
Phatr3_J50336
Phaeodactylum tricornutum
Phatr3_J50336
N
0.000
Thaps5285
Thalassiosira pseudonana
Thaps5285
N
0.000