OBART11G21780 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART11G21780 T255007_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART11G21780.1 MADS box 44 89
OBART11G21780.2 MADS box 44 89

Links

Other MADS box family TFs
Other Oryza barthii TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13266 Aegilops tauschii F775_13266 I 0.870
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.783
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.783
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.891
Bo8g068060 Brassica oleracea Bo8g068060 I 0.708
Bo8g104060 Brassica oleracea Bo8g104060 I 0.708
Bo9g072860 Brassica oleracea Bo9g072860 N 0.717
Bra016544 Brassica rapa Bra016544 I 0.708
Bra025685 Brassica rapa Bra025685 I 0.717
Bra031049 Brassica rapa Bra031049 I 0.708
PK21701.1 Cannabis sativa PK21701.1 I 0.729
Cla010361 Citrullus lanatus Cla010361 I 0.717
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.812
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.783
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.708
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.739
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.804
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.750
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.750
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.891
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.978
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.739
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.717
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.739
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.761
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.729
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.804
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.717
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.708
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.804
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.804
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.745
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N 0.717
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 1.000
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.978
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.978
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.978
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.978
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.957
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 1.000
OS11G0658700 Oryza sativa OS11G0658700 N 1.000
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.913
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.913
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.891
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.809
Pm024895 Prunus mume Pm024895 I 0.717
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.717
30138.m004061 Ricinus communis 30138.m004061 I 0.729
29813.m001508 Ricinus communis 29813.m001508 I 0.717
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.717
Si028357m.g Setaria italica Si028357m.g N 0.891
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.891
TCM_014051 Theobroma cacao TCM_014051 I 0.761
TCM_011687 Theobroma cacao TCM_011687 I 0.717
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.870
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.870
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.870
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.870
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.708
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.848