Lus10037166.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10037166.g T258627_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10037166 MADS box 10 55

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.978
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.891
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.870
29813.m001508 Ricinus communis 29813.m001508 I 0.870
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.870
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.870
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.870
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.870
PK03147.1 Cannabis sativa PK03147.1 I 0.870
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.848
TCM_011687 Theobroma cacao TCM_011687 I 0.848
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.848
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.848
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.848
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.826
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.826
Ca_16376 Cicer arietinum Ca_16376 I 0.826
Ca_18082 Cicer arietinum Ca_18082 I 0.826
Cla010361 Citrullus lanatus Cla010361 I 0.826
Pm006479 Prunus mume Pm006479 I 0.826
MDP0000146231 Malus domestica MDP0000146231 I 0.826
MDP0000146415 Malus domestica MDP0000146415 I 0.822
MDP0000773068 Malus domestica MDP0000773068 I 0.822
MDP0000919323 Malus domestica MDP0000919323 I 0.822
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.809
Bo9g072860 Brassica oleracea Bo9g072860 N 0.804
MDP0000147667 Malus domestica MDP0000147667 I 0.804
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.804
Bo7g080890 Brassica oleracea Bo7g080890 I 0.783
Bra017404 Brassica rapa Bra017404 I 0.783
Bra024792 Brassica rapa Bra024792 I 0.783
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.783
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.783
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.783
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.783
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.783
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.783
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.761
AGL30 Arabidopsis thaliana AT2G03060 I 0.761
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.761
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.761
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.761
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.739
F775_13266 Aegilops tauschii F775_13266 I 0.739
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.739
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.739
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.739
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.739
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.739
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.739
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.739
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.739
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.739
Cla018884 Citrullus lanatus Cla018884 I 0.739
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.739
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.739
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.739
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.739
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.723
AGL94 Arabidopsis thaliana AT1G69540 N 0.717
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.717
Bo6g109050 Brassica oleracea Bo6g109050 I 0.717
Bra004393 Brassica rapa Bra004393 I 0.717
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.717
OBART11G21780 Oryza barthii OBART11G21780 N 0.717
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.717
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.717
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.717
OS11G0658700 Oryza sativa OS11G0658700 N 0.717
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.717
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.717
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.717
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.717
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.714
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.702