Lus10036761.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10036761.g T258624_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10036761 MADS box 10 55

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.978
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.870
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.848
29813.m001508 Ricinus communis 29813.m001508 I 0.848
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.848
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.848
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.848
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.848
PK03147.1 Cannabis sativa PK03147.1 I 0.848
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.826
TCM_011687 Theobroma cacao TCM_011687 I 0.826
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.826
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.826
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.826
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.804
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.804
Ca_16376 Cicer arietinum Ca_16376 I 0.804
Ca_18082 Cicer arietinum Ca_18082 I 0.804
Cla010361 Citrullus lanatus Cla010361 I 0.804
Pm006479 Prunus mume Pm006479 I 0.804
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.804
MDP0000146231 Malus domestica MDP0000146231 I 0.804
Bo9g072860 Brassica oleracea Bo9g072860 N 0.783
MDP0000146415 Malus domestica MDP0000146415 I 0.783
MDP0000147667 Malus domestica MDP0000147667 I 0.783
MDP0000773068 Malus domestica MDP0000773068 I 0.783
MDP0000919323 Malus domestica MDP0000919323 I 0.783
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.783
Bo7g080890 Brassica oleracea Bo7g080890 I 0.761
Bra017404 Brassica rapa Bra017404 I 0.761
Bra024792 Brassica rapa Bra024792 I 0.761
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.761
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.761
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.761
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.761
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.761
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.761
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.739
AGL30 Arabidopsis thaliana AT2G03060 I 0.739
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.739
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.739
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.739
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.717
F775_13266 Aegilops tauschii F775_13266 I 0.717
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.717
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.717
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.717
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.717
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.717
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.717
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.717
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.717
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.717
Cla018884 Citrullus lanatus Cla018884 I 0.717
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.717
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.717
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.717
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.717
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.717