Bo9g072860 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo9g072860 T253199_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g072860.1 MADS box 97 142

Links

Other MADS box family TFs
Other Brassica oleracea TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra017404 Brassica rapa Bra017404 I 0.978
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.913
Ca_16376 Cicer arietinum Ca_16376 I 0.913
Bo7g080890 Brassica oleracea Bo7g080890 I 0.891
Bra024792 Brassica rapa Bra024792 I 0.891
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.891
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.891
Ca_18082 Cicer arietinum Ca_18082 I 0.891
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.891
MDP0000146231 Malus domestica MDP0000146231 I 0.891
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.891
PK03147.1 Cannabis sativa PK03147.1 I 0.891
MDP0000146415 Malus domestica MDP0000146415 I 0.889
MDP0000773068 Malus domestica MDP0000773068 I 0.889
MDP0000919323 Malus domestica MDP0000919323 I 0.889
AGL30 Arabidopsis thaliana AT2G03060 I 0.870
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.870
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.870
MDP0000147667 Malus domestica MDP0000147667 I 0.870
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.870
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.870
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.870
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.848
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.848
TCM_011687 Theobroma cacao TCM_011687 I 0.848
Pm006479 Prunus mume Pm006479 I 0.848
29813.m001508 Ricinus communis 29813.m001508 I 0.848
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.848
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.848
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.848
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.848
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.826
Cla010361 Citrullus lanatus Cla010361 I 0.826
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.826
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.809
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.804
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.804
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.804
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.804
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.783
F775_13266 Aegilops tauschii F775_13266 I 0.783
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.783
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.783
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.783
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.783
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.783
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.783
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.783
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.783
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.783
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.783
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.783
Bo6g109050 Brassica oleracea Bo6g109050 I 0.761
Bra004393 Brassica rapa Bra004393 I 0.761
GLYMA02G12131 Glycine max GLYMA02G12131 N 0.761
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.761
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.761
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.745
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.739
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.739
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.739
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.739
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.739
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.739
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.723
AGL94 Arabidopsis thaliana AT1G69540 N 0.717
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.717
Bo8g068060 Brassica oleracea Bo8g068060 I 0.717
Bo8g104060 Brassica oleracea Bo8g104060 I 0.717
Bra016544 Brassica rapa Bra016544 I 0.717
Bra025685 Brassica rapa Bra025685 I 0.717
Bra031049 Brassica rapa Bra031049 I 0.717
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.717
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.717
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.717
OBART11G21780 Oryza barthii OBART11G21780 N 0.717
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.717
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.717
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.717
OS11G0658700 Oryza sativa OS11G0658700 N 0.717
Si028357m.g Setaria italica Si028357m.g N 0.717
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.717
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.717
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.717
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.717