Gorai.013G086600 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.013G086600 T258501_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G086600.1 MADS box 10 56
Gorai.013G086600.2 MADS box 10 56

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.936
TCM_011687 Theobroma cacao TCM_011687 I 0.935
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.915
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.915
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.915
PK03147.1 Cannabis sativa PK03147.1 I 0.915
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.894
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.894
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.894
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.872
Pm006479 Prunus mume Pm006479 I 0.872
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.872
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.872
MDP0000146231 Malus domestica MDP0000146231 I 0.872
29813.m001508 Ricinus communis 29813.m001508 I 0.870
Ca_16376 Cicer arietinum Ca_16376 I 0.851
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.851
MDP0000146415 Malus domestica MDP0000146415 I 0.851
MDP0000147667 Malus domestica MDP0000147667 I 0.851
MDP0000773068 Malus domestica MDP0000773068 I 0.851
MDP0000919323 Malus domestica MDP0000919323 I 0.851
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.830
Ca_18082 Cicer arietinum Ca_18082 I 0.830
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.830
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.826
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.826
Bo9g072860 Brassica oleracea Bo9g072860 N 0.809
Cla010361 Citrullus lanatus Cla010361 I 0.809
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.809
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.809
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.804
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.804
Bra017404 Brassica rapa Bra017404 I 0.787
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.787
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.787
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.787
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.787
AGL30 Arabidopsis thaliana AT2G03060 I 0.783
GLYMA02G12131 Glycine max GLYMA02G12131 N 0.766
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.766
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.761
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.745
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.745
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.745
Bo7g080890 Brassica oleracea Bo7g080890 I 0.745
Bra024792 Brassica rapa Bra024792 I 0.745
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.739
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.739
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.723
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.723
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.723
Bo6g109050 Brassica oleracea Bo6g109050 I 0.717
Bra004393 Brassica rapa Bra004393 I 0.717
AGL94 Arabidopsis thaliana AT1G69540 N 0.702
Bo8g068060 Brassica oleracea Bo8g068060 I 0.702
Bo8g104060 Brassica oleracea Bo8g104060 I 0.702
Bra016544 Brassica rapa Bra016544 I 0.702
Bra031049 Brassica rapa Bra031049 I 0.702
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.702
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.702
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.702
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.702
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.702