AGL94 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Al_scaffold_0002_1615 T252781_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0002_1615 MADS box 10 56

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL94 Arabidopsis thaliana AT1G69540 N 0.957
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.913
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.891
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.851
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.804
Pm006479 Prunus mume Pm006479 I 0.804
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.804
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.804
MDP0000146415 Malus domestica MDP0000146415 I 0.800
MDP0000773068 Malus domestica MDP0000773068 I 0.800
MDP0000919323 Malus domestica MDP0000919323 I 0.800
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.787
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.787
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.787
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.787
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.787
PK03147.1 Cannabis sativa PK03147.1 I 0.787
Bo6g109050 Brassica oleracea Bo6g109050 I 0.783
Bra004393 Brassica rapa Bra004393 I 0.783
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.783
TCM_011687 Theobroma cacao TCM_011687 I 0.783
Ca_16376 Cicer arietinum Ca_16376 I 0.783
29813.m001508 Ricinus communis 29813.m001508 I 0.783
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.783
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.766
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.766
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.766
MDP0000147667 Malus domestica MDP0000147667 I 0.766
AGL30 Arabidopsis thaliana AT2G03060 I 0.761
Bra017404 Brassica rapa Bra017404 I 0.761
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.745
Ca_18082 Cicer arietinum Ca_18082 I 0.745
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.745
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.745
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.745
MDP0000146231 Malus domestica MDP0000146231 I 0.745
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.745
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.745
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.739
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.739
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.739
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.739
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.739
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.739
Bo9g072860 Brassica oleracea Bo9g072860 N 0.723
Cla010361 Citrullus lanatus Cla010361 I 0.723
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.723
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.723
Bo7g080890 Brassica oleracea Bo7g080890 I 0.717
Bra024792 Brassica rapa Bra024792 I 0.717
F775_13266 Aegilops tauschii F775_13266 I 0.717
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.717
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.717
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.717
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.717
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.717
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.717
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.717
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.702
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.702
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.702