Ciclev10010753m.g (Citrus clementina)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Ciclev10010753m.g T261474_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10010753m MBD 5 62

Links

Other MBD family TFs
Other Citrus clementina TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.793
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.759
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.707
MBD10 Arabidopsis thaliana AT1G15340 N 0.707
Bo8g066360 Brassica oleracea Bo8g066360 N 0.724
Bra016665 Brassica rapa Bra016665 N 0.724
PK04144.1 Cannabis sativa PK04144.1 N 0.828
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.707
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.707
Ca_19192 Cicer arietinum Ca_19192 N 0.776
Ca_06682 Cicer arietinum Ca_06682 N 0.828
Cla012920 Citrullus lanatus Cla012920 N 0.741
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.741
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.757
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.707
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.741
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.707
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.828
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.776
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.828
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.810
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.828
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.793
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.776
Gorai.001G042900 Gossypium raimondii Gorai.001G042900 N 0.707
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.724
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.776
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.810
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.828
MDP0000574053 Malus domestica MDP0000574053 N 0.793
MDP0000375866 Malus domestica MDP0000375866 N 0.776
MDP0000301302 Malus domestica MDP0000301302 N 0.759
MDP0000248422 Malus domestica MDP0000248422 N 0.707
MDP0000152128 Malus domestica MDP0000152128 N 0.793
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.724
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.741
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.793
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.793
Pm027560 Prunus mume Pm027560 N 0.793
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.741
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.776
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.793
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.776
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.759
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.759
TCM_038107 Theobroma cacao TCM_038107 N 0.828
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.724