Solyc10g081490.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc10g081490.1 T280259_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.903 0.978
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.866 0.925
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.866 0.925
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.852 0.925
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.852 0.925
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.835 0.925
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.835 0.925
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.827 0.914
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.827 0.914
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g081490.1.1 Myb 14 61
Solyc10g081490.1.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

310 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.scaffold_535000011 Branchiostoma floridae fgenesh2_pg.scaffold_535000011 N 0.000
CBN25334 Caenorhabditis brenneri CBN25334 N 0.000
orange1.1g036321m.g Citrus sinensis orange1.1g036321m.g N 0.000
orange1.1g014153m.g Citrus sinensis orange1.1g014153m.g N 0.000
CGOC_0001370301 Cylicostephanus goldi CGOC_0001370301 N 0.000
DAPPUDRAFT_336128 Daphnia pulex DAPPUDRAFT_336128 N 0.000
GA28914 Drosophila pseudoobscura FBgn0250273 N 0.000
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.000
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.000
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.000
estExt_fgenesh2_pg.C_390049 Monosiga brevicollis estExt_fgenesh2_pg.C_390049 N 0.000
OLONG_013579 Oryza longistaminata OLONG_013579 N 0.000
fgeneshPB_pg.10__1 Phycomyces blakesleeanus fgeneshPB_pg.10__1 N 0.000
fgeneshPB_pg.46__7 Phycomyces blakesleeanus fgeneshPB_pg.46__7 N 0.000
estExt_fgenesh1_kg.C_340020 Phytophthora capsici estExt_fgenesh1_kg.C_340020 N 0.000
Phyra76402 Phytophthora ramorum Phyra76402 N 0.000
PTTG_03070 Puccinia triticina PTTG_03070 N 0.000
GLOINDRAFT_16424 Rhizophagus irregularis GLOINDRAFT_16424 N 0.000
SMU15030327 Schmidtea mediterranea SMU15030327 N 0.000
SERLA73DRAFT_158240 Serpula lacrymans SERLA73DRAFT_158240 N 0.000
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N 0.000
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.000