VIT_18s0117g00210 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_18s0117g00210 T282109_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.725 0.849
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.725 0.849
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.679 0.817
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.674 0.742
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.674 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_18s0117g00210.t01 Myb 14 82
VIT_18s0117g00210.t01 Myb 88 133

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

363 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAG_02260 Allomyces macrogynus AMAG_02260 N
AMAG_00757 Allomyces macrogynus AMAG_00757 N
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I
Bo7g091510 Brassica oleracea Bo7g091510 N
Bra025350 Brassica rapa Bra025350 N
Bra033055 Brassica rapa Bra033055 N
A1O1_01197 Capronia coronata A1O1_01197 I
A1O3_08778 Capronia epimyces A1O3_08778 I
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I
G647_10093 Cladophialophora carrionii G647_10093 I
A1O7_01726 Cladophialophora yegresii A1O7_01726 I
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I
PV06_04154 Exophiala oligosperma PV06_04154 I
PV11_09703 Exophiala sideris PV11_09703 I
PV08_04655 Exophiala spinifera PV08_04655 I
PV05_09944 Exophiala xenobiotica PV05_09944 I
Lus10018073.g Linum usitatissimum Lus10018073.g N
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I
MTR_5g082570 Medicago truncatula MTR_5g082570 I
MTR_1g022345 Medicago truncatula MTR_1g022345 I
mgf024995m Mimulus guttatus mgf024995m I
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I
JL09_g4543 Pichia kudriavzevii JL09_g4543 N
PIIN_05794 Piriformospora indica PIIN_05794 I
RSKR_0000472700 Rhabditophanes kr3021 RSKR_0000472700 N
Z518_04911 Rhinocladiella mackenziei Z518_04911 I
29822.m003476 Ricinus communis 29822.m003476 I
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N