Pavir.J05795 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J05795 T289334_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05795.1.p Myb 115 161
Pavir.J05795.1.p Myb 169 213

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.000
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.000
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.000
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.000
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.000
ZAT10 Arabidopsis thaliana AT1G27730 D 0.000
ZAT4 Arabidopsis thaliana AT2G45120 D 0.000
AZF2 Arabidopsis thaliana AT3G19580 D 0.000
ZAT9 Arabidopsis thaliana AT3G60580 D 0.000
ZAT6 Arabidopsis thaliana AT5G04340 D 0.000
AZF1 Arabidopsis thaliana AT5G67450 D 0.000
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.000
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.000
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.000
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.000
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.000
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.000
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.000
Bo1g081350 Brassica oleracea Bo1g081350 I 0.000
Bo1g113530 Brassica oleracea Bo1g113530 I 0.000
Bo2g168030 Brassica oleracea Bo2g168030 I 0.000
Bo3g142840 Brassica oleracea Bo3g142840 I 0.000
Bo5g113850 Brassica oleracea Bo5g113850 I 0.000
Bo7g048650 Brassica oleracea Bo7g048650 I 0.000
Bo9g019120 Brassica oleracea Bo9g019120 I 0.000
Bo9g181170 Brassica oleracea Bo9g181170 I 0.000
Bra009464 Brassica rapa Bra009464 I 0.000
Bra010922 Brassica rapa Bra010922 I 0.000
Bra012914 Brassica rapa Bra012914 I 0.000
Bra022436 Brassica rapa Bra022436 I 0.000
Bra029985 Brassica rapa Bra029985 I 0.000
Bra031834 Brassica rapa Bra031834 I 0.000
Bra037845 Brassica rapa Bra037845 I 0.000
Bra038219 Brassica rapa Bra038219 I 0.000
PK10188.1 Cannabis sativa PK10188.1 I 0.000
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.000
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.000
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.000
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.000
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.000
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.000
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.000
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.000
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.000
Ca_01586 Cicer arietinum Ca_01586 I 0.000
Ca_18364 Cicer arietinum Ca_18364 I 0.000
Ca_23672 Cicer arietinum Ca_23672 I 0.000
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.000
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.000
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.000
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.000
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.000
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.000
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.000
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.000
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.000
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.000
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.000
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.000
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.000
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.000
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.000
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.000
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.000
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.000
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.000
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.000
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.000
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.000
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.000
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.000
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.000
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.000
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.000
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.000
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.000
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.000
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.000
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.000
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.000
MDP0000198015 Malus domestica MDP0000198015 I 0.000
MDP0000319225 Malus domestica MDP0000319225 I 0.000
MDP0000573176 Malus domestica MDP0000573176 I 0.000
MDP0000762756 Malus domestica MDP0000762756 I 0.000
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.000
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.000
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.000
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.000
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.000
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.000
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.000
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.000
mgf006006m Mimulus guttatus mgf006006m I 0.000
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.000
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.000
OB03G42170 Oryza brachyantha OB03G42170 I 0.000
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.000
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.000
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.000
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.000
Pm005390 Prunus mume Pm005390 I 0.000
Pm021284 Prunus mume Pm021284 I 0.000
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.000
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.000
28152.m000908 Ricinus communis 28152.m000908 I 0.000
30170.m013751 Ricinus communis 30170.m013751 I 0.000
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.000
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.000
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.000
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.000
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.000
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.000
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.000
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.000
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.000
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.000
TCM_007214 Theobroma cacao TCM_007214 I 0.000
TCM_034720 Theobroma cacao TCM_034720 I 0.000
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.000
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.000
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.000
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.000
GRMZM2G455889 Zea mays GRMZM2G455889 I 0.000