Cucsa.147930 (Cucumis sativus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Cucsa.147930 T322188_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.147930.1 SAND 25 132
Cucsa.147930.2 SAND 25 145

Links

Other SAND family TFs
Other Cucumis sativus TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.910
BRADI2G51790 Brachypodium distachyon BRADI2G51790 N 0.878
PK16281.1 Cannabis sativa PK16281.1 N 0.927
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.888
Ca_19014 Cicer arietinum Ca_19014 N 0.854
Cla007849 Citrullus lanatus Cla007849 N 0.994
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.962
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.859
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.967
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.928
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.889
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.973
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.974
MDP0000315130 Malus domestica MDP0000315130 N 0.905
MDP0000237588 Malus domestica MDP0000237588 N 0.905
MDP0000089136 Malus domestica MDP0000089136 N 0.967
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.918
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.934
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.945
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.952
OBART01G33150 Oryza barthii OBART01G33150 N 0.889
OB05G29560 Oryza brachyantha OB05G29560 N 0.843
OB01G42000 Oryza brachyantha OB01G42000 N 0.889
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.889
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.889
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.889
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.889
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.889
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.889
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.889
OS01G0780800 Oryza sativa OS01G0780800 N 0.889
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.882
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.880
Pm015354 Prunus mume Pm015354 N 0.909
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.909
29983.m003255 Ricinus communis 29983.m003255 N 0.969
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.880
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.969
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.860
Si002762m.g Setaria italica Si002762m.g N 0.844
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.905
TCM_007971 Theobroma cacao TCM_007971 N 0.909
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.909
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.915
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.904