Pavir.Bb02800 (Panicum virgatum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pavir.Bb02800 T323620_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb02800.1.p SBP 88 162

Links

Other SBP family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.000
SCR Arabidopsis thaliana AT3G54220 N 0.000
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.000
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N 0.000
Bo8g083500 Brassica oleracea Bo8g083500 N 0.000
PK22310.1 Cannabis sativa PK22310.1 N 0.000
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.000
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.000
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.000
Ca_09530 Cicer arietinum Ca_09530 N 0.000
Cla012346 Citrullus lanatus Cla012346 N 0.000
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.000
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.000
MLOC_79758 Hordeum vulgare MLOC_79758 N 0.000
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.000
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.000
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.000
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.000
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.000
mgf012242m Mimulus guttatus mgf012242m N 0.000
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.000
OB07G24850 Oryza brachyantha OB07G24850 N 0.000
ONIVA11G01600 Oryza nivara ONIVA11G01600 N 0.000
OPUNC11G01240 Oryza punctata OPUNC11G01240 N 0.000
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.000
OS07G0567700 Oryza sativa OS07G0567700 N 0.000
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.000
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.000
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.000
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.000
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.000
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N 0.000
TRIUR3_28106 Triticum urartu TRIUR3_28106 N 0.000
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.000