TBX15 (Loxodonta africana)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSLAFG00000018452 T340002_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.920 1.000
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.920 1.000
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.920 1.000
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.920 1.000
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.920 1.000
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.920 1.000
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.901 0.929
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.901 0.929
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.901 0.929
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.810 0.720
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.761 0.588
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.738 0.637
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.738 0.637
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.738 0.637
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.738 0.637
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.738 0.637
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.738 0.637
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.738 0.637
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.738 0.637
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.738 0.637
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.738 0.637
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.738 0.637
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.738 0.637
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.738 0.637
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.738 0.637
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.738 0.637
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.738 0.637
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.738 0.637
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000015466 T-box 115 304

Links

Other T-box family TFs
Other Loxodonta africana TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I
WER Arabidopsis thaliana AT5G14750 D
MYB23 Arabidopsis thaliana AT5G40330 D
GL1 Arabidopsis thaliana AT3G27920 I
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I
Bo2g012170 Brassica oleracea Bo2g012170 I
Bo7g090950 Brassica oleracea Bo7g090950 I
Bo9g165670 Brassica oleracea Bo9g165670 I
Bra025589 Brassica rapa Bra025589 I
Bra039065 Brassica rapa Bra039065 I
Bra008740 Brassica rapa Bra008740 I
Bra023486 Brassica rapa Bra023486 I
Bra025311 Brassica rapa Bra025311 I
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I
Carubv10005698m.g Capsella rubella Carubv10005698m.g I
Carubv10001990m.g Capsella rubella Carubv10001990m.g I
Carubv10018791m.g Capsella rubella Carubv10018791m.g I
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I
Ca_17627 Cicer arietinum Ca_17627 I
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I
MDP0000650225 Malus domestica MDP0000650225 I
MDP0000578193 Malus domestica MDP0000578193 I
MDP0000537324 Malus domestica MDP0000537324 I
MDP0000199965 Malus domestica MDP0000199965 I
MDP0000164048 Malus domestica MDP0000164048 I
cassava26193.m1 Manihot esculenta cassava26193.m1 I
cassava27350.m1 Manihot esculenta cassava27350.m1 I
MTR_8g027345 Medicago truncatula MTR_8g027345 I
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I
Pm024725 Prunus mume Pm024725 I
Pm006678 Prunus mume Pm006678 I
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I
TCM_016886 Theobroma cacao TCM_016886 I
TCM_012057 Theobroma cacao TCM_012057 I
TCM_010360 Theobroma cacao TCM_010360 I
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I