SROB_0001853501 (Schistosoma rodhaini)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 SROB_0001853501 T343613_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001853501-mRNA-1 TBP 34 116
SROB_0001853501-mRNA-1 TBP 124 207

Links

Other TBP family TFs
Other Schistosoma rodhaini TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARF17 Arabidopsis lyrata scaffold_202748.1 N
ARF17 Arabidopsis thaliana AT1G77850 N
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N
BRADI5G27400 Brachypodium distachyon BRADI5G27400 N
Bo6g081980 Brassica oleracea Bo6g081980 N
Bo6g121520 Brassica oleracea Bo6g121520 N
Bra015651 Brassica rapa Bra015651 N
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N
Carubv10019991m.g Capsella rubella Carubv10019991m.g N
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I
Cla022413 Citrullus lanatus Cla022413 I
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I
Cucsa.381330 Cucumis sativus Cucsa.381330 I
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I
GLYMA13G02410 Glycine max GLYMA13G02410 N
GLYMA04G43350 Glycine max GLYMA04G43350 N
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I
Lus10009770.g Linum usitatissimum Lus10009770.g N
Lus10024753.g Linum usitatissimum Lus10024753.g N
Lus10024754.g Linum usitatissimum Lus10024754.g N
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I
MDP0000256621 Malus domestica MDP0000256621 I
MDP0000232116 Malus domestica MDP0000232116 N
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I
MTR_3g073420 Medicago truncatula MTR_3g073420 N
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I
OB04G37650 Oryza brachyantha OB04G37650 N
OPUNC04G28180 Oryza punctata OPUNC04G28180 N
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I
Pm019126 Prunus mume Pm019126 I
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I
29908.m005953 Ricinus communis 29908.m005953 I
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I
Si021833m.g Setaria italica Si021833m.g N
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N
PGSC0003DMG400027798 Solanum tuberosum PGSC0003DMG400027798 N
Sb06g033970 Sorghum bicolor Sb06g033970 N
TCM_035002 Theobroma cacao TCM_035002 I
Traes_2AL_C70217249 Triticum aestivum Traes_2AL_C70217249 N
GRMZM5G808366 Zea mays GRMZM5G808366 N