MTR_8g463380 (Medicago truncatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MTR_8g463380 T344051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.954 0.540
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.952 0.500
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.952 0.500
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.952 0.500
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.952 0.532
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.945 0.524
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.907 0.452
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.894 0.427
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.892 0.419
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.866 0.371
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.846 0.379
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.846 0.379
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.842 0.363
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.837 0.347
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH19533 TCP 52 327

Links

Other TCP family TFs
Other Medicago truncatula TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31908 Aegilops tauschii F775_31908 N
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I
SPL2 Arabidopsis thaliana AT5G43270 N
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I
Bo5g051980 Brassica oleracea Bo5g051980 I
Bo7g065290 Brassica oleracea Bo7g065290 N
Bo9g058970 Brassica oleracea Bo9g058970 N
Bra027478 Brassica rapa Bra027478 N
Bra030040 Brassica rapa Bra030040 I
Bra033671 Brassica rapa Bra033671 N
PK16953.1 Cannabis sativa PK16953.1 N
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N
Carubv10026434m.g Capsella rubella Carubv10026434m.g N
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I
Ca_11356 Cicer arietinum Ca_11356 I
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N
GLYMA11G36980 Glycine max GLYMA11G36980 N
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N
MLOC_11199 Hordeum vulgare MLOC_11199 N
MLOC_62426 Hordeum vulgare MLOC_62426 N
LPERR02G02980 Leersia perrieri LPERR02G02980 N
LPERR02G04880 Leersia perrieri LPERR02G04880 N
LPERR06G22200 Leersia perrieri LPERR06G22200 N
Lus10006411.g Linum usitatissimum Lus10006411.g I
Lus10011356.g Linum usitatissimum Lus10011356.g I
Lus10021614.g Linum usitatissimum Lus10021614.g N
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N
MDP0000155354 Malus domestica MDP0000155354 N
MDP0000249364 Malus domestica MDP0000249364 N
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N
MTR_3g085180 Medicago truncatula MTR_3g085180 N
mgf010397m Mimulus guttatus mgf010397m N
mgf019346m Mimulus guttatus mgf019346m I
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I
OBART02G03260 Oryza barthii OBART02G03260 N
OBART06G26610 Oryza barthii OBART06G26610 N
OB02G12930 Oryza brachyantha OB02G12930 N
OB02G14840 Oryza brachyantha OB02G14840 N
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N
SPL3 Oryza indica BGIOSGA007499 N
BGIOSGA007643 Oryza indica BGIOSGA007643 N
SPL12 Oryza indica BGIOSGA020577 N
OLONG_012160 Oryza longistaminata OLONG_012160 N
OLONG_025693 Oryza longistaminata OLONG_025693 N
OMERI02G03900 Oryza meridionalis OMERI02G03900 N
OMERI02G06420 Oryza meridionalis OMERI02G06420 N
OMERI06G26720 Oryza meridionalis OMERI06G26720 N
ONIVA02G03070 Oryza nivara ONIVA02G03070 N
ONIVA02G05960 Oryza nivara ONIVA02G05960 N
ONIVA06G29160 Oryza nivara ONIVA06G29160 N
OPUNC02G02570 Oryza punctata OPUNC02G02570 N
OPUNC02G04800 Oryza punctata OPUNC02G04800 N
OPUNC06G24320 Oryza punctata OPUNC06G24320 N
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N
OS02G0139400 Oryza sativa OS02G0139400 N
SPL4 Oryza sativa OS02G0174100 N
SPL12 Oryza sativa OS06G0703500 N
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N
Pavir.J20730 Panicum virgatum Pavir.J20730 N
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N
Pm007020 Prunus mume Pm007020 N
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N
29929.m004641 Ricinus communis 29929.m004641 I
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I
Si017749m.g Setaria italica Si017749m.g N
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N
Sb04g003175 Sorghum bicolor Sb04g003175 N
Sb04g004940 Sorghum bicolor Sb04g004940 N
TCM_008772 Theobroma cacao TCM_008772 N
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N
TRIUR3_09477 Triticum urartu TRIUR3_09477 N
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I
SPL2 Vitis vinifera VIT_11s0065g00170 N
GRMZM2G065451 Zea mays GRMZM2G065451 N
GRMZM2G097275 Zea mays GRMZM2G097275 N
GRMZM2G126827 Zea mays GRMZM2G126827 N
GRMZM2G156621 Zea mays GRMZM2G156621 N
GRMZM2G163813 Zea mays GRMZM2G163813 N