CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_26761
(
Cicer arietinum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Ca_26761
T006400_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN
NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.812
0.938
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC
GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.804
0.938
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_26761
AP2
86
135
SQYRGVTLYRRTGRWESHIWDCGKQVYLGGFDTSHAAARAYDRAAIRFRG
Links
Other
AP2
family TFs
Other
Cicer arietinum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G416701
Zea mays
GRMZM2G416701
I
0.816
PGSC0003DMG400011046
Solanum tuberosum
PGSC0003DMG400011046
I
0.816
PGSC0003DMG400012038
Solanum tuberosum
PGSC0003DMG400012038
I
0.816
Sb10g001490
Sorghum bicolor
Sb10g001490
I
0.816
Cla020387
Citrullus lanatus
Cla020387
I
0.816
Cucsa.165940
Cucumis sativus
Cucsa.165940
I
0.816
Gorai.003G139800
Gossypium raimondii
Gorai.003G139800
I
0.816
Gorai.011G241700
Gossypium raimondii
Gorai.011G241700
I
0.816
Lus10040365.g
Linum usitatissimum
Lus10040365.g
I
0.816
PK16652.1
Cannabis sativa
PK16652.1
I
0.816
TOE2
Arabidopsis thaliana
AT5G60120
D
0.812
Bo9g141100
Brassica oleracea
Bo9g141100
I
0.812
Bra002510
Brassica rapa
Bra002510
I
0.812
Bra020262
Brassica rapa
Bra020262
I
0.812
Bostr.26833s0222
Boechera stricta
Bostr.26833s0222
I
0.812
Cagra.1317s0005
Capsella grandiflora
Cagra.1317s0005
I
0.812
Carubv10026292m.g
Capsella rubella
Carubv10026292m.g
I
0.812
Thhalv10013367m.g
Eutrema salsugineum
Thhalv10013367m.g
I
0.812
MTR_1g049140
Medicago truncatula
MTR_1g049140
I
0.805
SMZ
Arabidopsis thaliana
AT3G54990
D
0.804
Bo8g087280
Brassica oleracea
Bo8g087280
I
0.804
Bra007123
Brassica rapa
Bra007123
I
0.804
SMZ
Arabidopsis lyrata
fgenesh2_kg.5__1910__AT3G54990.1
I
0.804
Bostr.0697s0115
Boechera stricta
Bostr.0697s0115
I
0.804
Cagra.1742s0021
Capsella grandiflora
Cagra.1742s0021
I
0.804
Carubv10018526m.g
Capsella rubella
Carubv10018526m.g
I
0.804
Eucgr.G02793
Eucalyptus grandis
Eucgr.G02793
I
0.804
Thhalv10010513m.g
Eutrema salsugineum
Thhalv10010513m.g
I
0.804
GLYMA02G09600
Glycine max
GLYMA02G09600
I
0.800
GLYMA10G22390
Glycine max
GLYMA10G22390
I
0.800
Bo6g068410
Brassica oleracea
Bo6g068410
I
0.788
PRUPE_ppa018704mg
Prunus persica
PRUPE_ppa018704mg
I
0.782
Pm018608
Prunus mume
Pm018608
I
0.782
gene23316-v1.0-hybrid
Fragaria vesca
gene23316-v1.0-hybrid
I
0.779
MDP0000281079
Malus domestica
MDP0000281079
I
0.773
MDP0000285955
Malus domestica
MDP0000285955
I
0.773
SNZ
Arabidopsis thaliana
AT2G39250
I
0.751
SNZ
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001673
I
0.751
Bostr.23794s0149
Boechera stricta
Bostr.23794s0149
I
0.751
Cagra.0716s0040
Capsella grandiflora
Cagra.0716s0040
I
0.744
Carubv10023614m.g
Capsella rubella
Carubv10023614m.g
I
0.744