Eucgr.D02102 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.D02102 T008139_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF039
M01620_2.00 		Arabidopsis thaliana
NNRCCGACDN
NHGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH8101 		0.751 0.880
ERF039
M06635_2.00 		Arabidopsis thaliana
HNNHDYCRCCGMCRN
NYGKCGGYGRHDNND		 Dap-seq
OMalley et al.(2016)
At4g16750_col_a 		0.751 0.880
ERF039
M06636_2.00 		Arabidopsis thaliana
NNNNNNYCACCGACAHH
DDTGTCGGTGRNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a 		0.751 0.880
ERF038
M06608_2.00 		Arabidopsis thaliana
NHNHHDYCRCCGACA
TGTCGGYGRHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF38_col_a 		0.751 0.860
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.733 0.860
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.733 0.860
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.733 0.860
Q3HS42_BRANA
M09739_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII4_01 		0.690 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02102.1 AP2 54 105

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene08876-v1.0-hybrid Fragaria vesca gene08876-v1.0-hybrid I 0.790
gene08873-v1.0-hybrid Fragaria vesca gene08873-v1.0-hybrid I 0.757
Lus10007799.g Linum usitatissimum Lus10007799.g I 0.756
Lus10004738.g Linum usitatissimum Lus10004738.g I 0.756
Bo7g104770 Brassica oleracea Bo7g104770 I 0.753
fgenesh2_kg.7__2633__AT4G16750.1 Arabidopsis lyrata fgenesh2_kg.7__2633__AT4G16750.1 I 0.751
Bra012693 Brassica rapa Bra012693 I 0.751
Bra040092 Brassica rapa Bra040092 I 0.751
Thhalv10026276m.g Eutrema salsugineum Thhalv10026276m.g I 0.751
Gorai.007G028800 Gossypium raimondii Gorai.007G028800 I 0.751
ERF039 Arabidopsis thaliana AT4G16750 D 0.751
Bo1g053270 Brassica oleracea Bo1g053270 I 0.751
ERF038 Arabidopsis thaliana AT2G35700 D 0.751
TCM_015930 Theobroma cacao TCM_015930 I 0.746
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I 0.744
cassava4979.m1 Manihot esculenta cassava4979.m1 I 0.741
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I 0.740
Pm023417 Prunus mume Pm023417 I 0.740
MTR_4g100650 Medicago truncatula MTR_4g100650 I 0.737
GLYMA05G04920 Glycine max GLYMA05G04920 I 0.737
LjT37H17.40.nd Lotus japonicus LjT37H17.40.nd I 0.737
GLYMA17G15310 Glycine max GLYMA17G15310 I 0.737
Bostr.30275s0134 Boechera stricta Bostr.30275s0134 I 0.736
Carubv10005867m.g Capsella rubella Carubv10005867m.g I 0.736
Cagra.0993s0081 Capsella grandiflora Cagra.0993s0081 I 0.733
Thhalv10017258m.g Eutrema salsugineum Thhalv10017258m.g I 0.733
Bo4g036220 Brassica oleracea Bo4g036220 I 0.733
Carubv10024111m.g Capsella rubella Carubv10024111m.g I 0.733
Q3HS44_BRANA Brassica napus Q3HS44_BRANA D 0.733
ATERF38 Arabidopsis lyrata fgenesh2_kg.4__1597__AT2G35700.1 I 0.733
Q3HS43_BRANA Brassica napus Q3HS43_BRANA D 0.733
Bra005314 Brassica rapa Bra005314 I 0.733
Q5MAR7_BRANA Brassica napus Q5MAR7_BRANA D 0.733
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I 0.732
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I 0.732
PK25970.1 Cannabis sativa PK25970.1 I 0.731
Bo3g028500 Brassica oleracea Bo3g028500 I 0.730
Bra023026 Brassica rapa Bra023026 I 0.730
Bostr.23794s0528 Boechera stricta Bostr.23794s0528 I 0.729
Cucsa.321050 Cucumis sativus Cucsa.321050 I 0.728
Cla005715 Citrullus lanatus Cla005715 I 0.728
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I 0.727
Ca_12765 Cicer arietinum Ca_12765 I 0.724
OS02G0656600 Oryza sativa OS02G0656600 I 0.723
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.723
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.723
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.723
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.723
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.723
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.723
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.723
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.723
Si010703m.g Setaria italica Si010703m.g I 0.723
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.723
OS04G0549700 Oryza sativa OS04G0549700 I 0.723
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.723
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.723
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.723
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.723
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.723
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.723
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.723
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.723
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I 0.722
LjT33K05.50.nd Lotus japonicus LjT33K05.50.nd I 0.721
28353.m000054 Ricinus communis 28353.m000054 I 0.721
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.717
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.713
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.713
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.708
POPTR_0003s07700 Populus trichocarpa POPTR_0003s07700 I 0.699
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I 0.698
MTR_8g013860 Medicago truncatula MTR_8g013860 I 0.698
SapurV1A.1528s0030 Salix purpurea SapurV1A.1528s0030 I 0.697
POPTR_0001s15550 Populus trichocarpa POPTR_0001s15550 I 0.696
Bra003415 Brassica rapa Bra003415 I 0.692
Bo6g077080 Brassica oleracea Bo6g077080 I 0.692
cassava33300.m1 Manihot esculenta cassava33300.m1 I 0.691
Q3HS42_BRANA Brassica napus Q3HS42_BRANA D 0.690
MDP0000790788 Malus domestica MDP0000790788 I 0.690
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I 0.689
Cla012859 Citrullus lanatus Cla012859 I 0.688
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.688
GLYMA07G02001 Glycine max GLYMA07G02001 I 0.688
SapurV1A.1087s0080 Salix purpurea SapurV1A.1087s0080 I 0.687
SapurV1A.1360s0120 Salix purpurea SapurV1A.1360s0120 I 0.687
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.686
Bra000366 Brassica rapa Bra000366 I 0.685
Bo3g037480 Brassica oleracea Bo3g037480 I 0.685
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.684
Bo1g009990 Brassica oleracea Bo1g009990 I 0.684
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I 0.684
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I 0.684
GLYMA08G21650 Glycine max GLYMA08G21650 I 0.684
Bra011383 Brassica rapa Bra011383 I 0.684
Bra007539 Brassica rapa Bra007539 I 0.683
Bo8g095240 Brassica oleracea Bo8g095240 I 0.683
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.683
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.683
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.683
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.682
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.682
GLYMA11G03790 Glycine max GLYMA11G03790 I 0.681
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I 0.680
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.680
OS04G0549800 Oryza sativa OS04G0549800 I 0.680
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.680
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.680
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.680
OBART04G20820 Oryza barthii OBART04G20820 I 0.680
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.680
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.680
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.680
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.679
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.679
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.679
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.677
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.677
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.677
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.677
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.677
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.677
OB11G16300 Oryza brachyantha OB11G16300 I 0.677
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.677
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.677
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.677
OS02G0657000 Oryza sativa OS02G0657000 I 0.677
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.677
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.677
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.677
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.677
OS04G0550200 Oryza sativa OS04G0550200 I 0.677
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.677
Si012254m.g Setaria italica Si012254m.g I 0.677
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.677
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.677
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.677